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fix: pass trialByNameNoScope to initializeObsVarDatasetByName
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src/main/java/org/breedinginsight/brapps/importer/services/processors/experiment/create/workflow/steps/PopulateExistingPendingImportObjectsStep.java

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -101,7 +101,7 @@ public ProcessContext process(ImportContext input) {
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// interesting we're using our data model instead of brapi for locations
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Map<String, PendingImportObject<ProgramLocation>> locationByName = initializeUniqueLocationNames(program, experimentImportRows);
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Map<String, PendingImportObject<BrAPIListDetails>> obsVarDatasetByName = initializeObsVarDatasetByName(program, experimentImportRows);
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Map<String, PendingImportObject<BrAPIListDetails>> obsVarDatasetByName = initializeObsVarDatasetByName(program, experimentImportRows, trialByNameNoScope);
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Map<String, PendingImportObject<BrAPIGermplasm>> existingGermplasmByGID = initializeExistingGermplasmByGID(program, experimentImportRows);
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Map<String, BrAPIObservation> existingObsByObsHash = new HashMap<>();
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@@ -229,9 +229,9 @@ private Map<String, PendingImportObject<BrAPIStudy>> initializeStudyByNameNoScop
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*
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*/
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private Map<String, PendingImportObject<BrAPIListDetails>> initializeObsVarDatasetByName(Program program,
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List<ExperimentObservation> experimentImportRows) {
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List<ExperimentObservation> experimentImportRows,
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Map<String, PendingImportObject<BrAPITrial>> trialByNameNoScope) {
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Map<String, PendingImportObject<BrAPIListDetails>> obsVarDatasetByName = new HashMap<>();
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Map<String, PendingImportObject<BrAPITrial>> trialByNameNoScope = new HashMap<>();
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Optional<PendingImportObject<BrAPITrial>> trialPIO = getTrialPIO(experimentImportRows, trialByNameNoScope);
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