Skip to content

Commit 0c4a986

Browse files
authored
Update deepsea.rst
1 parent 1822c2d commit 0c4a986

File tree

1 file changed

+5
-2
lines changed

1 file changed

+5
-2
lines changed

docs/deepsea.rst

Lines changed: 5 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -44,10 +44,13 @@ We support three types of input: vcf, fasta, bed. If you want to predict effects
4444

4545
**Bed format** provides another way to specify sequences in human reference genome (hg19). The bed input should specify 1000bp-length regions. A minimal example is ``chr1 109817091 109818090``. The three columns are chromosome, start position, and end position.
4646

47-
We recommend using the web server if you have <10,000 variants or sequences. You will experience degraded performance when submitting a larger set of sequeneces. In those instances, we suggest that you split the set into multiple <10,000 submissions, or run the standalone version on your local machine, or contact our group directy.
48-
47+
Genome coordinates
48+
~~~~~~~~~~~~
4949
We support only ``GRCh37/hg19`` genome coordinates. You can use LiftOver to convert your coordinates to the correct version.
5050

51+
Large submissions
52+
~~~~~~~~~~~~
53+
We recommend using the web server if you have <10,000 variants or sequences. You will experience degraded performance when submitting a larger set of sequeneces. In those instances, we suggest that you split the set into multiple <10,000 submissions, or run the standalone version on your local machine, or contact our group directy.
5154

5255
In-silico mutagenesis
5356
------------

0 commit comments

Comments
 (0)