Update environment

Author: juliohm

Manifest.toml

@@ -236,10 +236,10 @@ uuid = "0b7ba130-8d10-5ba8-a3d6-c5182647fed9"
 version = "1.21.6+2"
 
 [[deps.Bzip2_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "8873e196c2eb87962a2048b3b8e08946535864a1"
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
+git-tree-sha1 = "1b96ea4a01afe0ea4090c5c8039690672dd13f2e"
 uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0"
-version = "1.0.8+4"
+version = "1.0.9+0"
 
 [[deps.CEnum]]
 git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc"
@@ -351,9 +351,9 @@ version = "0.4.5"
 
 [[deps.CodecZlib]]
 deps = ["TranscodingStreams", "Zlib_jll"]
-git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759"
+git-tree-sha1 = "545a177179195e442472a1c4dc86982aa7a1bef0"
 uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
-version = "0.7.6"
+version = "0.7.7"
 
 [[deps.CodecZstd]]
 deps = ["TranscodingStreams", "Zstd_jll"]
@@ -625,9 +625,9 @@ version = "1.3.1"
 
 [[deps.Dictionaries]]
 deps = ["Indexing", "Random", "Serialization"]
-git-tree-sha1 = "61ab242274c0d44412d8eab38942a49aa46de9d0"
+git-tree-sha1 = "1cdab237b6e0d0960d5dcbd2c0ebfa15fa6573d9"
 uuid = "85a47980-9c8c-11e8-2b9f-f7ca1fa99fb4"
-version = "0.4.3"
+version = "0.4.4"
 
 [[deps.DiffResults]]
 deps = ["StaticArraysCore"]
@@ -715,9 +715,9 @@ version = "0.1.11"
 
 [[deps.Expat_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "e51db81749b0777b2147fbe7b783ee79045b8e99"
+git-tree-sha1 = "d55dffd9ae73ff72f1c0482454dcf2ec6c6c4a63"
 uuid = "2e619515-83b5-522b-bb60-26c02a35a201"
-version = "2.6.4+3"
+version = "2.6.5+0"
 
 [[deps.Extents]]
 git-tree-sha1 = "063512a13dbe9c40d999c439268539aa552d1ae6"
@@ -765,9 +765,9 @@ version = "0.8.3"
 
 [[deps.FilePathsBase]]
 deps = ["Compat", "Dates"]
-git-tree-sha1 = "7878ff7172a8e6beedd1dea14bd27c3c6340d361"
+git-tree-sha1 = "2ec417fc319faa2d768621085cc1feebbdee686b"
 uuid = "48062228-2e41-5def-b9a4-89aafe57970f"
-version = "0.9.22"
+version = "0.9.23"
 weakdeps = ["Mmap", "Test"]
 
     [deps.FilePathsBase.extensions]
@@ -792,9 +792,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"]
 
 [[deps.FiniteDiff]]
 deps = ["ArrayInterface", "LinearAlgebra", "Setfield"]
-git-tree-sha1 = "84e3a47db33be7248daa6274b287507dd6ff84e8"
+git-tree-sha1 = "f089ab1f834470c525562030c8cfde4025d5e915"
 uuid = "6a86dc24-6348-571c-b903-95158fe2bd41"
-version = "2.26.2"
+version = "2.27.0"
 
     [deps.FiniteDiff.extensions]
     FiniteDiffBandedMatricesExt = "BandedMatrices"
@@ -878,9 +878,9 @@ version = "301.800.400+0"
 
 [[deps.GEOS_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "f561356a09a8f650b622f6697a30f2ad76fc29ce"
+git-tree-sha1 = "560794197bccecdb92e9d38af691bd369685c250"
 uuid = "d604d12d-fa86-5845-992e-78dc15976526"
-version = "3.13.0+0"
+version = "3.13.1+0"
 
 [[deps.GLM]]
 deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"]
@@ -966,35 +966,35 @@ version = "0.3.0"
 
 [[deps.GeoStats]]
 deps = ["CategoricalArrays", "Chain", "CoDa", "CoordGridTransforms", "CoordRefSystems", "DataScienceTraits", "Dates", "DensityRatioEstimation", "Distances", "GeoStatsBase", "GeoStatsFunctions", "GeoStatsModels", "GeoStatsProcesses", "GeoStatsTransforms", "GeoStatsValidation", "GeoTables", "LossFunctions", "Meshes", "Reexport", "Rotations", "Statistics", "StatsLearnModels", "TableTransforms", "Tables", "Unitful"]
-git-tree-sha1 = "0dfc3c10409f0aa47ded88d18ce69c2ca39487c3"
+git-tree-sha1 = "a3f97efd68964916f36a1f42c7e9e3f2d3ad1494"
 uuid = "dcc97b0b-8ce5-5539-9008-bb190f959ef6"
-version = "0.73.1"
+version = "0.73.4"
 
 [[deps.GeoStatsBase]]
 deps = ["CategoricalArrays", "ColumnSelectors", "DataScienceTraits", "DensityRatioEstimation", "Distances", "Distributions", "GeoTables", "LinearAlgebra", "Meshes", "Optim", "Rotations", "StaticArrays", "StatsBase", "Tables", "TypedTables", "Unitful"]
-git-tree-sha1 = "fcfbce45628e72ebe2b8b29b59405afcf926e82f"
+git-tree-sha1 = "a5478bbb5973c47733ad08816d57563c075fdc60"
 uuid = "323cb8eb-fbf6-51c0-afd0-f8fba70507b2"
-version = "0.46.4"
+version = "0.46.5"
 weakdeps = ["Makie"]
 
     [deps.GeoStatsBase.extensions]
     GeoStatsBaseMakieExt = "Makie"
 
 [[deps.GeoStatsFunctions]]
 deps = ["Bessels", "CategoricalArrays", "DataScienceTraits", "Distances", "GeoTables", "LinearAlgebra", "Meshes", "NearestNeighbors", "OhMyThreads", "Optim", "PrecompileTools", "Printf", "Random", "Setfield", "StaticArrays", "Statistics", "TableTransforms", "Tables", "Unitful"]
-git-tree-sha1 = "043c5386b1058e6e185d6af4207a586333143afd"
+git-tree-sha1 = "78cb9d1f7bc2186f7d3cb9e90436d74efc72f654"
 uuid = "6771c435-bc22-4842-b0c3-41852a255103"
-version = "0.9.0"
+version = "0.9.3"
 weakdeps = ["Makie"]
 
     [deps.GeoStatsFunctions.extensions]
     GeoStatsFunctionsMakieExt = "Makie"
 
 [[deps.GeoStatsModels]]
 deps = ["Combinatorics", "CoordRefSystems", "Distances", "Distributions", "GeoStatsFunctions", "GeoTables", "LinearAlgebra", "Meshes", "Statistics", "Tables", "Unitful"]
-git-tree-sha1 = "8b05c94c35568ac8e794844fc5a96a1d71255636"
+git-tree-sha1 = "f935d5d3382195c0cc7ac37029125c83981d5059"
 uuid = "ad987403-13c5-47b5-afee-0a48f6ac4f12"
-version = "0.9.0"
+version = "0.9.2"
 
 [[deps.GeoStatsProcesses]]
 deps = ["Bessels", "CpuId", "Distances", "Distributed", "Distributions", "FFTW", "GeoStatsFunctions", "GeoStatsModels", "GeoTables", "LinearAlgebra", "Meshes", "ProgressMeter", "Random", "Statistics", "Tables", "Unitful"]
@@ -1020,9 +1020,9 @@ version = "0.10.1"
 
 [[deps.GeoStatsValidation]]
 deps = ["ColumnSelectors", "DataScienceTraits", "DensityRatioEstimation", "GeoStatsBase", "GeoStatsModels", "GeoStatsTransforms", "GeoTables", "LossFunctions", "Meshes", "StatsLearnModels"]
-git-tree-sha1 = "b0ffd0df01a6001284b567ceda5163830e4a0608"
+git-tree-sha1 = "3a88ac7c7815d44881078aa7de7050fe6c74b3a0"
 uuid = "36f43c0d-3673-45fc-9557-6860e708e7aa"
-version = "0.3.23"
+version = "0.3.24"
 
 [[deps.GeoTIFF]]
 deps = ["ColorTypes", "FixedPointNumbers", "MappedArrays", "StaticArrays", "TiffImages"]
@@ -1276,9 +1276,9 @@ uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f"
 version = "1.3.1"
 
 [[deps.IrrationalConstants]]
-git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2"
+git-tree-sha1 = "e2222959fbc6c19554dc15174c81bf7bf3aa691c"
 uuid = "92d709cd-6900-40b7-9082-c6be49f344b6"
-version = "0.2.2"
+version = "0.2.4"
 
 [[deps.Isoband]]
 deps = ["isoband_jll"]
@@ -1683,9 +1683,9 @@ version = "0.3.2"
 
 [[deps.Meshes]]
 deps = ["Bessels", "CircularArrays", "Colorfy", "CoordRefSystems", "DelaunayTriangulation", "Distances", "LinearAlgebra", "NearestNeighbors", "Random", "Rotations", "ScopedValues", "SparseArrays", "StaticArrays", "StatsBase", "TiledIteration", "TransformsBase", "Unitful"]
-git-tree-sha1 = "b611d6ffff81cde2ff972ba2d880c3d0b9720192"
+git-tree-sha1 = "11cfe3c6415c618133fd5c8cddf5879acf5416b9"
 uuid = "eacbb407-ea5a-433e-ab97-5258b1ca43fa"
-version = "0.52.13"
+version = "0.52.15"
 weakdeps = ["Makie"]
 
     [deps.Meshes.extensions]
@@ -1737,9 +1737,9 @@ version = "7.8.3"
 
 [[deps.NaNMath]]
 deps = ["OpenLibm_jll"]
-git-tree-sha1 = "fe891aea7ccd23897520db7f16931212454e277e"
+git-tree-sha1 = "cc0a5deefdb12ab3a096f00a6d42133af4560d71"
 uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
-version = "1.1.1"
+version = "1.1.2"
 
 [[deps.NamedTupleTools]]
 git-tree-sha1 = "90914795fc59df44120fe3fff6742bb0d7adb1d0"
@@ -1870,9 +1870,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372"
 version = "1.3.3+0"
 
 [[deps.OrderedCollections]]
-git-tree-sha1 = "12f1439c4f986bb868acda6ea33ebc78e19b95ad"
+git-tree-sha1 = "cc4054e898b852042d7b503313f7ad03de99c3dd"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
-version = "1.7.0"
+version = "1.8.0"
 
 [[deps.PCRE2_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -2040,9 +2040,9 @@ version = "1.0.1"
 
 [[deps.QuadGK]]
 deps = ["DataStructures", "LinearAlgebra"]
-git-tree-sha1 = "cda3b045cf9ef07a08ad46731f5a3165e56cf3da"
+git-tree-sha1 = "9da16da70037ba9d701192e27befedefb91ec284"
 uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
-version = "2.11.1"
+version = "2.11.2"
 
     [deps.QuadGK.extensions]
     QuadGKEnzymeExt = "Enzyme"
@@ -2155,9 +2155,9 @@ version = "3.7.1"
 
 [[deps.SQLite_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"]
-git-tree-sha1 = "e84fab7d16107342d7638fbd519151d9a0d80720"
+git-tree-sha1 = "9a325057cdb9b066f1f96dc77218df60fe3007cb"
 uuid = "76ed43ae-9a5d-5a62-8c75-30186b810ce8"
-version = "3.47.2+2"
+version = "3.48.0+0"
 
 [[deps.ScientificTypesBase]]
 git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b"
@@ -2397,9 +2397,9 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"]
 
 [[deps.StatsLearnModels]]
 deps = ["ColumnSelectors", "DataScienceTraits", "DecisionTree", "Distances", "Distributions", "GLM", "NearestNeighbors", "StatsBase", "TableTransforms", "Tables"]
-git-tree-sha1 = "b2d91b5368331e8c1d56a3159c95d7545236ff08"
+git-tree-sha1 = "6d4e71c69298d4f1225a2245fd60530f79e74b31"
 uuid = "c146b59d-1589-421c-8e09-a22e554fd05c"
-version = "1.0.1"
+version = "1.1.1"
 weakdeps = ["MLJModelInterface"]
 
     [deps.StatsLearnModels.extensions]
@@ -2743,9 +2743,9 @@ version = "1.5.7+0"
 
 [[deps.Zygote]]
 deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"]
-git-tree-sha1 = "dc51db46b62d407731bb10e45da5240bc9579068"
+git-tree-sha1 = "dabc8bf48149b0220010c2d3e555b0ca84400ce1"
 uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
-version = "0.7.3"
+version = "0.7.4"
 
     [deps.Zygote.extensions]
     ZygoteColorsExt = "Colors"
@@ -2842,9 +2842,9 @@ version = "1.4.0+0"
 
 [[deps.libzip_jll]]
 deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "OpenSSL_jll", "XZ_jll", "Zlib_jll", "Zstd_jll"]
-git-tree-sha1 = "e797fa066eba69f4c0585ffbd81bc780b5118ce2"
+git-tree-sha1 = "86addc139bca85fdf9e7741e10977c45785727b7"
 uuid = "337d8026-41b4-5cde-a456-74a10e5b31d1"
-version = "1.11.2+2"
+version = "1.11.3+0"
 
 [[deps.nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -2863,10 +2863,10 @@ uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
 version = "17.4.0+2"
 
 [[deps.snappy_jll]]
-deps = ["Artifacts", "JLLWrappers", "LZO_jll", "Libdl", "Lz4_jll", "Zlib_jll"]
-git-tree-sha1 = "a6c92533edec9755b3c1083b028da19a41f92e25"
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
+git-tree-sha1 = "8bb12ecfc3ffde2ef72a957cf2fab27cc193d251"
 uuid = "fe1e1685-f7be-5f59-ac9f-4ca204017dfd"
-version = "1.2.1+3"
+version = "1.2.2+0"
 
 [[deps.x264_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]

preface.qmd

@@ -115,7 +115,7 @@ using Pkg
 pkg"activate @GDSJL"
 
 # install framework
-pkg"add GeoStats@0.73.1"
+pkg"add GeoStats@0.73.4"
 
 # install IO module
 pkg"add GeoIO@1.19.10"