From 3d067ca1d63b41740e8b825a21ef8c9c53c5393a Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 13:34:56 +0000 Subject: [PATCH 01/11] updated folder structure --- README.md | 2 +- {codonPython => src/codonPython}/__init__.py | 0 {codonPython => src/codonPython}/age_bands.py | 0 {codonPython => src/codonPython}/check_consistent_measures.py | 0 .../codonPython}/check_consistent_submissions.py | 0 {codonPython => src/codonPython}/check_nat_val.py | 0 {codonPython => src/codonPython}/check_null.py | 0 {codonPython => src/codonPython}/dateValidator.py | 0 {codonPython => src/codonPython}/file_utils.py | 0 {codonPython => src/codonPython}/nhsNumber.py | 0 {codonPython => src/codonPython}/nhsd_colours.py | 0 {codonPython => src/codonPython}/suppression.py | 0 {codonPython => src/codonPython}/tableFromSql.py | 0 {codonPython => src/codonPython}/tolerance.py | 0 {codonPython/tests => tests}/age_bands_test.py | 0 {codonPython/tests => tests}/check_consistent_measures_test.py | 0 .../tests => tests}/check_consistent_submissions_test.py | 0 {codonPython/tests => tests}/check_nat_val_test.py | 0 {codonPython/tests => tests}/check_null_test.py | 0 {codonPython/tests => tests}/dateValidator_test.py | 0 {codonPython/tests => tests}/file_utils_test.py | 0 {codonPython/tests => tests}/nhsNumber_test.py | 0 {codonPython/tests => tests}/suppression_test.py | 0 {codonPython/tests => tests}/tolerance_test.py | 0 24 files changed, 1 insertion(+), 1 deletion(-) rename {codonPython => src/codonPython}/__init__.py (100%) rename {codonPython => src/codonPython}/age_bands.py (100%) rename {codonPython => src/codonPython}/check_consistent_measures.py (100%) rename {codonPython => src/codonPython}/check_consistent_submissions.py (100%) rename {codonPython => src/codonPython}/check_nat_val.py (100%) rename {codonPython => src/codonPython}/check_null.py (100%) rename {codonPython => src/codonPython}/dateValidator.py (100%) rename {codonPython => src/codonPython}/file_utils.py (100%) rename {codonPython => src/codonPython}/nhsNumber.py (100%) rename {codonPython => src/codonPython}/nhsd_colours.py (100%) rename {codonPython => src/codonPython}/suppression.py (100%) rename {codonPython => src/codonPython}/tableFromSql.py (100%) rename {codonPython => src/codonPython}/tolerance.py (100%) rename {codonPython/tests => tests}/age_bands_test.py (100%) rename {codonPython/tests => tests}/check_consistent_measures_test.py (100%) rename {codonPython/tests => tests}/check_consistent_submissions_test.py (100%) rename {codonPython/tests => tests}/check_nat_val_test.py (100%) rename {codonPython/tests => tests}/check_null_test.py (100%) rename {codonPython/tests => tests}/dateValidator_test.py (100%) rename {codonPython/tests => tests}/file_utils_test.py (100%) rename {codonPython/tests => tests}/nhsNumber_test.py (100%) rename {codonPython/tests => tests}/suppression_test.py (100%) rename {codonPython/tests => tests}/tolerance_test.py (100%) diff --git a/README.md b/README.md index 4166203..2fe1d33 100644 --- a/README.md +++ b/README.md @@ -4,7 +4,7 @@ [![codecov](https://codecov.io/gh/codonlibrary/codonPython/branch/master/graph/badge.svg)](https://codecov.io/gh/codonlibrary/codonPython) [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black) -## What is `codon`? +## What is `codon`? The `codon` project was created to increase code sharing, code consistency, coding standards, and encourage collaboration. Package documentation is available on the [GitHub pages](https://codonlibrary.github.io/codonPython/). `codonPython` aims to reduce the barrier for entry for analysis and provide software development experience for those at a higher level of technical ability. diff --git a/codonPython/__init__.py b/src/codonPython/__init__.py similarity index 100% rename from codonPython/__init__.py rename to src/codonPython/__init__.py diff --git a/codonPython/age_bands.py b/src/codonPython/age_bands.py similarity index 100% rename from codonPython/age_bands.py rename to src/codonPython/age_bands.py diff --git a/codonPython/check_consistent_measures.py b/src/codonPython/check_consistent_measures.py similarity index 100% rename from codonPython/check_consistent_measures.py rename to src/codonPython/check_consistent_measures.py diff --git a/codonPython/check_consistent_submissions.py b/src/codonPython/check_consistent_submissions.py similarity index 100% rename from codonPython/check_consistent_submissions.py rename to src/codonPython/check_consistent_submissions.py diff --git a/codonPython/check_nat_val.py b/src/codonPython/check_nat_val.py similarity index 100% rename from codonPython/check_nat_val.py rename to src/codonPython/check_nat_val.py diff --git a/codonPython/check_null.py b/src/codonPython/check_null.py similarity index 100% rename from codonPython/check_null.py rename to src/codonPython/check_null.py diff --git a/codonPython/dateValidator.py b/src/codonPython/dateValidator.py similarity index 100% rename from codonPython/dateValidator.py rename to src/codonPython/dateValidator.py diff --git a/codonPython/file_utils.py b/src/codonPython/file_utils.py similarity index 100% rename from codonPython/file_utils.py rename to src/codonPython/file_utils.py diff --git a/codonPython/nhsNumber.py b/src/codonPython/nhsNumber.py similarity index 100% rename from codonPython/nhsNumber.py rename to src/codonPython/nhsNumber.py diff --git a/codonPython/nhsd_colours.py b/src/codonPython/nhsd_colours.py similarity index 100% rename from codonPython/nhsd_colours.py rename to src/codonPython/nhsd_colours.py diff --git a/codonPython/suppression.py b/src/codonPython/suppression.py similarity index 100% rename from codonPython/suppression.py rename to src/codonPython/suppression.py diff --git a/codonPython/tableFromSql.py b/src/codonPython/tableFromSql.py similarity index 100% rename from codonPython/tableFromSql.py rename to src/codonPython/tableFromSql.py diff --git a/codonPython/tolerance.py b/src/codonPython/tolerance.py similarity index 100% rename from codonPython/tolerance.py rename to src/codonPython/tolerance.py diff --git a/codonPython/tests/age_bands_test.py b/tests/age_bands_test.py similarity index 100% rename from codonPython/tests/age_bands_test.py rename to tests/age_bands_test.py diff --git a/codonPython/tests/check_consistent_measures_test.py b/tests/check_consistent_measures_test.py similarity index 100% rename from codonPython/tests/check_consistent_measures_test.py rename to tests/check_consistent_measures_test.py diff --git a/codonPython/tests/check_consistent_submissions_test.py b/tests/check_consistent_submissions_test.py similarity index 100% rename from codonPython/tests/check_consistent_submissions_test.py rename to tests/check_consistent_submissions_test.py diff --git a/codonPython/tests/check_nat_val_test.py b/tests/check_nat_val_test.py similarity index 100% rename from codonPython/tests/check_nat_val_test.py rename to tests/check_nat_val_test.py diff --git a/codonPython/tests/check_null_test.py b/tests/check_null_test.py similarity index 100% rename from codonPython/tests/check_null_test.py rename to tests/check_null_test.py diff --git a/codonPython/tests/dateValidator_test.py b/tests/dateValidator_test.py similarity index 100% rename from codonPython/tests/dateValidator_test.py rename to tests/dateValidator_test.py diff --git a/codonPython/tests/file_utils_test.py b/tests/file_utils_test.py similarity index 100% rename from codonPython/tests/file_utils_test.py rename to tests/file_utils_test.py diff --git a/codonPython/tests/nhsNumber_test.py b/tests/nhsNumber_test.py similarity index 100% rename from codonPython/tests/nhsNumber_test.py rename to tests/nhsNumber_test.py diff --git a/codonPython/tests/suppression_test.py b/tests/suppression_test.py similarity index 100% rename from codonPython/tests/suppression_test.py rename to tests/suppression_test.py diff --git a/codonPython/tests/tolerance_test.py b/tests/tolerance_test.py similarity index 100% rename from codonPython/tests/tolerance_test.py rename to tests/tolerance_test.py From d13f547957ab385777de4b63aed4405435d75fa0 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 13:48:34 +0000 Subject: [PATCH 02/11] added pyproject.toml --- pyproject.toml | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 pyproject.toml diff --git a/pyproject.toml b/pyproject.toml new file mode 100644 index 0000000..c11bd82 --- /dev/null +++ b/pyproject.toml @@ -0,0 +1,25 @@ +[build-system] +requires = ["hatchling"] +build-backend = "hatchling.build" + +[project] +name = "codonPython" +version = "0.2.1" +requires-python = ">=3.8" +authors = [ + {name = "NHS Digital DIS Team", email = "paul.ellingham@nhs.net"}, +] +maintainers = [ + {name = "NHS Digital Data Science Team", email = "england.rapchampions@nhs.net"} +] +description = "This is a first attempt at how our package will work." +readme = "README.md" +license = {file = "LICENSE"} +keywords = ["NHS", "Python"] +classifiers = [ + "Development Status :: 4 - Beta", + "Programming Language :: Python" +] + +[project.urls] +Repository = "https://github.com/NHSDigital/codonPython" \ No newline at end of file From 378ea7035d9e84bbfbe16924a51153f418a14dc3 Mon Sep 17 00:00:00 2001 From: "warren.davies4" Date: Tue, 5 Nov 2024 16:11:19 +0000 Subject: [PATCH 03/11] updated project name to codonpython --- src/{codonPython => codonpython}/__init__.py | 0 src/{codonPython => codonpython}/age_bands.py | 0 .../check_consistent_measures.py | 0 .../check_consistent_submissions.py | 0 src/{codonPython => codonpython}/check_nat_val.py | 0 src/{codonPython => codonpython}/check_null.py | 0 src/{codonPython => codonpython}/dateValidator.py | 0 src/{codonPython => codonpython}/file_utils.py | 0 src/{codonPython => codonpython}/nhsNumber.py | 0 src/{codonPython => codonpython}/nhsd_colours.py | 0 src/{codonPython => codonpython}/suppression.py | 0 src/{codonPython => codonpython}/tableFromSql.py | 0 src/{codonPython => codonpython}/tolerance.py | 0 tests/age_bands_test.py | 2 +- tests/check_consistent_measures_test.py | 2 +- tests/check_consistent_submissions_test.py | 2 +- tests/check_nat_val_test.py | 2 +- tests/check_null_test.py | 2 +- tests/dateValidator_test.py | 2 +- tests/file_utils_test.py | 6 +++--- tests/nhsNumber_test.py | 2 +- tests/suppression_test.py | 2 +- tests/tolerance_test.py | 2 +- 23 files changed, 12 insertions(+), 12 deletions(-) rename src/{codonPython => codonpython}/__init__.py (100%) rename src/{codonPython => codonpython}/age_bands.py (100%) rename src/{codonPython => codonpython}/check_consistent_measures.py (100%) rename src/{codonPython => codonpython}/check_consistent_submissions.py (100%) rename src/{codonPython => codonpython}/check_nat_val.py (100%) rename src/{codonPython => codonpython}/check_null.py (100%) rename src/{codonPython => codonpython}/dateValidator.py (100%) rename src/{codonPython => codonpython}/file_utils.py (100%) rename src/{codonPython => codonpython}/nhsNumber.py (100%) rename src/{codonPython => codonpython}/nhsd_colours.py (100%) rename src/{codonPython => codonpython}/suppression.py (100%) rename src/{codonPython => codonpython}/tableFromSql.py (100%) rename src/{codonPython => codonpython}/tolerance.py (100%) diff --git a/src/codonPython/__init__.py b/src/codonpython/__init__.py similarity index 100% rename from src/codonPython/__init__.py rename to src/codonpython/__init__.py diff --git a/src/codonPython/age_bands.py b/src/codonpython/age_bands.py similarity index 100% rename from src/codonPython/age_bands.py rename to src/codonpython/age_bands.py diff --git a/src/codonPython/check_consistent_measures.py b/src/codonpython/check_consistent_measures.py similarity index 100% rename from src/codonPython/check_consistent_measures.py rename to src/codonpython/check_consistent_measures.py diff --git a/src/codonPython/check_consistent_submissions.py b/src/codonpython/check_consistent_submissions.py similarity index 100% rename from src/codonPython/check_consistent_submissions.py rename to src/codonpython/check_consistent_submissions.py diff --git a/src/codonPython/check_nat_val.py b/src/codonpython/check_nat_val.py similarity index 100% rename from src/codonPython/check_nat_val.py rename to src/codonpython/check_nat_val.py diff --git a/src/codonPython/check_null.py b/src/codonpython/check_null.py similarity index 100% rename from src/codonPython/check_null.py rename to src/codonpython/check_null.py diff --git a/src/codonPython/dateValidator.py b/src/codonpython/dateValidator.py similarity index 100% rename from src/codonPython/dateValidator.py rename to src/codonpython/dateValidator.py diff --git a/src/codonPython/file_utils.py b/src/codonpython/file_utils.py similarity index 100% rename from src/codonPython/file_utils.py rename to src/codonpython/file_utils.py diff --git a/src/codonPython/nhsNumber.py b/src/codonpython/nhsNumber.py similarity index 100% rename from src/codonPython/nhsNumber.py rename to src/codonpython/nhsNumber.py diff --git a/src/codonPython/nhsd_colours.py b/src/codonpython/nhsd_colours.py similarity index 100% rename from src/codonPython/nhsd_colours.py rename to src/codonpython/nhsd_colours.py diff --git a/src/codonPython/suppression.py b/src/codonpython/suppression.py similarity index 100% rename from src/codonPython/suppression.py rename to src/codonpython/suppression.py diff --git a/src/codonPython/tableFromSql.py b/src/codonpython/tableFromSql.py similarity index 100% rename from src/codonPython/tableFromSql.py rename to src/codonpython/tableFromSql.py diff --git a/src/codonPython/tolerance.py b/src/codonpython/tolerance.py similarity index 100% rename from src/codonPython/tolerance.py rename to src/codonpython/tolerance.py diff --git a/tests/age_bands_test.py b/tests/age_bands_test.py index f0200c5..c4c6aee 100644 --- a/tests/age_bands_test.py +++ b/tests/age_bands_test.py @@ -1,4 +1,4 @@ -from codonPython import age_bands +from codonpython import age_bands import numpy as np import math import pytest diff --git a/tests/check_consistent_measures_test.py b/tests/check_consistent_measures_test.py index a4a05ff..93b60e9 100644 --- a/tests/check_consistent_measures_test.py +++ b/tests/check_consistent_measures_test.py @@ -1,4 +1,4 @@ -from codonPython.check_consistent_measures import check_consistent_measures +from codonpython.check_consistent_measures import check_consistent_measures import pandas as pd import numpy as np import pytest diff --git a/tests/check_consistent_submissions_test.py b/tests/check_consistent_submissions_test.py index 2c76fe6..d5910ed 100644 --- a/tests/check_consistent_submissions_test.py +++ b/tests/check_consistent_submissions_test.py @@ -1,4 +1,4 @@ -from codonPython.check_consistent_submissions import check_consistent_submissions +from codonpython.check_consistent_submissions import check_consistent_submissions import pandas as pd import numpy as np import pytest diff --git a/tests/check_nat_val_test.py b/tests/check_nat_val_test.py index 22b2c9d..eab8a67 100644 --- a/tests/check_nat_val_test.py +++ b/tests/check_nat_val_test.py @@ -1,4 +1,4 @@ -from codonPython.check_nat_val import check_nat_val +from codonpython.check_nat_val import check_nat_val import pytest import pandas as pd diff --git a/tests/check_null_test.py b/tests/check_null_test.py index c5baeb3..3f157f5 100644 --- a/tests/check_null_test.py +++ b/tests/check_null_test.py @@ -1,4 +1,4 @@ -from codonPython.check_null import check_null +from codonpython.check_null import check_null import numpy as np import pandas as pd import pytest diff --git a/tests/dateValidator_test.py b/tests/dateValidator_test.py index 77e5abf..b449a96 100644 --- a/tests/dateValidator_test.py +++ b/tests/dateValidator_test.py @@ -1,4 +1,4 @@ -from codonPython import dateValidator +from codonpython import dateValidator import pytest diff --git a/tests/file_utils_test.py b/tests/file_utils_test.py index 12effb2..ca56be4 100644 --- a/tests/file_utils_test.py +++ b/tests/file_utils_test.py @@ -1,6 +1,6 @@ -from codonPython.file_utils import compare -from codonPython.file_utils import file_search -from codonPython.file_utils import import_files +from codonpython.file_utils import compare +from codonpython.file_utils import file_search +from codonpython.file_utils import import_files import numpy as np import pytest import pandas as pd diff --git a/tests/nhsNumber_test.py b/tests/nhsNumber_test.py index c1b966a..d3a7f03 100644 --- a/tests/nhsNumber_test.py +++ b/tests/nhsNumber_test.py @@ -1,4 +1,4 @@ -from codonPython.nhsNumber import nhsNumberGenerator, nhsNumberValidator +from codonpython.nhsNumber import nhsNumberGenerator, nhsNumberValidator import pytest import random diff --git a/tests/suppression_test.py b/tests/suppression_test.py index 53cdfad..bfcb4b0 100644 --- a/tests/suppression_test.py +++ b/tests/suppression_test.py @@ -1,4 +1,4 @@ -from codonPython.suppression import suppress_value +from codonpython.suppression import suppress_value import pytest diff --git a/tests/tolerance_test.py b/tests/tolerance_test.py index 29e371f..73505b2 100644 --- a/tests/tolerance_test.py +++ b/tests/tolerance_test.py @@ -1,4 +1,4 @@ -from codonPython.tolerance import check_tolerance +from codonpython.tolerance import check_tolerance import numpy as np import pandas as pd import pandas.util.testing as pdt From 6831af7f3ed13bb98278408016f89dda438c4a98 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 16:30:33 +0000 Subject: [PATCH 04/11] passed sum as string to .agg() instead of built-in sum function --- src/codonpython/check_nat_val.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/codonpython/check_nat_val.py b/src/codonpython/check_nat_val.py index 56d0501..0ef00fc 100644 --- a/src/codonpython/check_nat_val.py +++ b/src/codonpython/check_nat_val.py @@ -86,7 +86,7 @@ def check_nat_val( raise KeyError("Check column names correspond to the DataFrame.") # aggregate values by measure and breakdown grouped = ( - df.groupby([measure_col, breakdown_col]).agg({value_col: sum}).reset_index() + df.groupby([measure_col, breakdown_col]).agg({value_col: "sum"}).reset_index() ) national = grouped.loc[grouped[breakdown_col] == nat_val].reset_index() non_national = grouped.loc[grouped[breakdown_col] != nat_val].reset_index() From b0a1e69901d82189b8a9b6af072b378eebe68805 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 16:54:31 +0000 Subject: [PATCH 05/11] updated check_tolerance() to replace deprecated df.append() with pd.concat() --- src/codonpython/tolerance.py | 23 +++++++++++------------ 1 file changed, 11 insertions(+), 12 deletions(-) diff --git a/src/codonpython/tolerance.py b/src/codonpython/tolerance.py index b3f0d14..ef7ab75 100644 --- a/src/codonpython/tolerance.py +++ b/src/codonpython/tolerance.py @@ -122,18 +122,17 @@ def check_tolerance( _, yhat_l, yhat_u = wls_prediction_std(model, t_predict, alpha=alpha) # Store model results in master frame - results = results.append( - pd.DataFrame( - { - "t": t_orig, - "yhat_u": yhat_u, - "yobs": y_predict, - "yhat": yhat, - "yhat_l": yhat_l, - "polynomial": degree, - } - ), - ignore_index=True, + degree_results = pd.DataFrame( + { + "t": t_orig, + "yhat_u": yhat_u, + "yobs": y_predict, + "yhat": yhat, + "yhat_l": yhat_l, + "polynomial": degree, + } ) + results = pd.concat([results, degree_results], ignore_index=True) + return results From aa5e660c6c5b4c79acf27a6f15ee86e85369aa50 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 17:18:11 +0000 Subject: [PATCH 06/11] updated pandas.util.testing to pandas.testing --- tests/tolerance_test.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/tolerance_test.py b/tests/tolerance_test.py index 73505b2..d16c787 100644 --- a/tests/tolerance_test.py +++ b/tests/tolerance_test.py @@ -1,7 +1,7 @@ from codonpython.tolerance import check_tolerance import numpy as np import pandas as pd -import pandas.util.testing as pdt +import pandas.testing as pdt import pytest testdata = [ From 4bf45a115bba950c8a7e6d77a8032db66f75dfa2 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Tue, 5 Nov 2024 17:21:10 +0000 Subject: [PATCH 07/11] added poetry.lock and updated pyproject.toml with dependencies --- poetry.lock | 1736 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-requires = ["hatchling"] -build-backend = "hatchling.build" - -[project] -name = "codonPython" +[tool.poetry] +name = "codonpython" version = "0.2.1" -requires-python = ">=3.8" -authors = [ - {name = "NHS Digital DIS Team", email = "paul.ellingham@nhs.net"}, -] -maintainers = [ - {name = "NHS Digital Data Science Team", email = "england.rapchampions@nhs.net"} -] description = "This is a first attempt at how our package will work." +authors = ["NHS Digital DIS Team"] +license = "MIT" readme = "README.md" -license = {file = "LICENSE"} -keywords = ["NHS", "Python"] -classifiers = [ - "Development Status :: 4 - Beta", - "Programming Language :: Python" -] -[project.urls] -Repository = "https://github.com/NHSDigital/codonPython" \ No newline at end of file +[tool.poetry.dependencies] +python = "^3.10" +pandas = "^2.2.3" +numpy = "^2.1.3" +scipy = "^1.14.1" +sqlalchemy = "^2.0.36" +scikit-learn = "^1.5.2" +statsmodels = "^0.14.4" +seaborn = "^0.13.2" +sphinx = "^8.1.3" +sphinx-rtd-theme = 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'./tests' @pytest.mark.parametrize("expected", [({})]) def test_import_files_BAU(expected): - assert import_files() == expected - + assert import_files(file_import_path) == expected @pytest.mark.parametrize("subdir, expected", [(True, {})]) def test_import_files_BAU_2(subdir, expected): - assert import_files(subdir=subdir) == expected + assert import_files(file_import_path, subdir=subdir) == expected @pytest.mark.parametrize("strict,subdir, expected", [(True, True, {})]) def test_import_files_BAU_3(strict, subdir, expected): - assert import_files(strict=strict, subdir=subdir) == expected + assert import_files(file_import_path, strict=strict, subdir=subdir) == expected # ----------------Console output------------------------- From 3774dc3f6daeb64818e97a6a43ba4bcacad64381 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Wed, 6 Nov 2024 13:41:47 +0000 Subject: [PATCH 09/11] removed upper version bound from dependencies in pyproject.toml --- pyproject.toml | 26 +++++++++++++------------- 1 file changed, 13 insertions(+), 13 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 9c924d4..10fd40a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -7,19 +7,19 @@ license = "MIT" readme = "README.md" [tool.poetry.dependencies] -python = "^3.10" -pandas = "^2.2.3" -numpy = "^2.1.3" -scipy = "^1.14.1" -sqlalchemy = "^2.0.36" -scikit-learn = "^1.5.2" -statsmodels = "^0.14.4" -seaborn = "^0.13.2" -sphinx = "^8.1.3" -sphinx-rtd-theme = "^3.0.1" -flake8 = "^7.1.1" -m2r = "^0.3.1" -pytest = "^8.3.3" +python = ">=3.10" +pandas = ">=2.2.3" +numpy = ">=2.1.3" +scipy = ">=1.14.1" +sqlalchemy = ">=2.0.36" +scikit-learn = ">=1.5.2" +statsmodels = ">=0.14.4" +seaborn = ">=0.13.2" +sphinx = ">=8.1.3" +sphinx-rtd-theme = ">=3.0.1" +flake8 = ">=7.1.1" +m2r = ">=0.3.1" +pytest = ">=8.3.3" [build-system] From 564eccc4aac8e64b21259564ce8eaaa4487f9057 Mon Sep 17 00:00:00 2001 From: Warren Davies Date: Wed, 6 Nov 2024 15:05:48 +0000 Subject: [PATCH 10/11] removed requirements.txt --- requirements.txt | 11 ----------- 1 file changed, 11 deletions(-) delete mode 100644 requirements.txt diff --git a/requirements.txt b/requirements.txt deleted file mode 100644 index 6f8d603..0000000 --- a/requirements.txt +++ /dev/null @@ -1,11 +0,0 @@ -numpy>=1.16.0 -scipy>=0.19.0 -pandas>=0.24.0 -sqlalchemy>=1.3.5 -scikit-learn>=0.21.2 -statsmodels>=0.10.0 -seaborn>=0.9.0 -sphinx>=2.2.2 -sphinx-rtd-theme>=0.4.3 -flake8>=3.7.9 -m2r>=0.2.1 From 9c96115f2fb15c382c753ee987493b71e70018e8 Mon Sep 17 00:00:00 2001 From: warren-davies4 <112185584+warren-davies4@users.noreply.github.com> Date: Wed, 6 Nov 2024 15:07:46 +0000 Subject: [PATCH 11/11] updated poetry lockfile --- poetry.lock | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/poetry.lock b/poetry.lock index 14b0738..8467b76 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1732,5 +1732,5 @@ zstd = ["zstandard (>=0.18.0)"] [metadata] lock-version = "2.0" -python-versions = "^3.10" -content-hash = 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