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[Append Scan] Add `eq` and `hash` methods to `ManifestFile` #5653

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Run time

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Job	Run time
lint-and-test (3.9)	4m 6s
lint-and-test (3.10)	4m 2s
integration-test (3.9)	13m 40s
integration-test (3.11)	13m 27s
lint-and-test (3.11)	3m 54s
integration-test (3.12)	13m 55s
lint-and-test (3.12)	4m 13s
integration-test (3.10)	16m 3s
	1h 13m 20s