First of all, thanks for the amazing work on this tool, really easy to use and it'll be an incredible selling point for me to pitch Mill and a more modern build process for some services at work!
I was testing this in an internal repository and had some issues with the dependency graph not loading, after some debugging (adding projects incrementally and reading the output of generate), I've pinpointed the issue to Version Ranges.
One of the dependencies of this project is org.jongo:jongo:1.5.0, with depends on com.fasterxml.jackson.core:jackson-core:[2.7.0,2.12.3]. When the manifest is generated with this type of version range, the Dependency Graph page fails to load, downgrading to org.jongo:jongo:1.4.1 that does not include version ranges for Jackson works perfectly.
Github has some way of dealing with this, if the project has a pom.xml it shows the version range correctly, as seen here:

But I did not find anything on the documentation of the Dependency Submission API.