File tree Expand file tree Collapse file tree 7 files changed +14
-10
lines changed
Expand file tree Collapse file tree 7 files changed +14
-10
lines changed Original file line number Diff line number Diff line change 2121#
2222# writtent by CPP people
2323#
24- # Submission command for Lemaitre3
24+ # Submission command for Lemaitre4
2525#
2626# sbatch cpp_fmriprep.slurm <subjID> <TaskName>
2727#
Original file line number Diff line number Diff line change 2121#
2222# writtent by CPP people
2323#
24- # Submission command for Lemaitre3
24+ # Submission command for Lemaitre4
2525#
2626# sbatch cpp_mriqc.slurm <subjID>
2727#
Original file line number Diff line number Diff line change 2121#
2222# writtent by CPP people
2323#
24- # Submission command for Lemaitre3 after running mriqc for each participant
24+ # Submission command for Lemaitre4 after running mriqc for each participant
2525#
2626# sbatch cpp_mriqc_group.slurm
2727
Original file line number Diff line number Diff line change 22
33To contribute see [ here] ( https://cpp-lln-lab.github.io/CPP_HPC/contributing/ )
44
5- - First of all access one the clusters (this has been tried on _ Lemaitre3 _ )
5+ - First of all access one the clusters (this has been tried on _ Lemaitre4 _ )
66- Upgrade ` pip ` .
77
88``` bash
Original file line number Diff line number Diff line change @@ -71,7 +71,11 @@ to choose the cluster that best meets your necessities)
7171
7272ThrFor example two clusters with different characteristics (part of the CECI cluster):
7373
74- ##### Lemaitre3
74+ ##### Lemaitre3
75+
76+ !!! Warning
77+
78+ SHUTDOWN FORM JULY 1ST 2024 AND REPLACED BY LEMAITRE4 !!!!!
7579
7680- Louvain-la-Neuve
7781- Nodes 96 GB RAM
Original file line number Diff line number Diff line change @@ -38,7 +38,7 @@ cd path/to/containers
3838datald update --merge
3939``````
4040
41- Depending on the cluster “unlock” is needed or not. No need for ` lemaitre3` .
41+ Depending on the cluster “unlock” is needed or not. No need for ` lemaitre3` . !!! TO CHECK ON LEMAITRE4
4242
4343` ` ` bash
4444datalad unlock containers/images/bids/bids-fmriprep--21.0.1.sing
@@ -70,7 +70,7 @@ Content of the `cpp_fmriprep.slurm` file (download and edit from [here](cpp_fmri
7070On the cluster prompt, submit the jobs as:
7171
7272```bash
73- # Submission command for Lemaitre3
73+ # Submission command for Lemaitre4
7474
7575# USAGE on cluster:
7676
Original file line number Diff line number Diff line change @@ -43,7 +43,7 @@ cd path/to/containers
4343datald update --merge
4444``````
4545
46- Depending on the cluster “unlock” is needed or not. No need for ` lemaitre3` .
46+ Depending on the cluster “unlock” is needed or not. No need for ` lemaitre3` . !! TO CHECK ON LEMAITRE4
4747
4848` ` ` bash
4949datalad unlock containers/images/bids/bids-mriqc--23.1.0.sing
@@ -75,7 +75,7 @@ Content of the `cpp_mriqc.slurm` file (download and edit from [here](cpp_mriqc.s
7575On the cluster prompt, submit the jobs as:
7676
7777```bash
78- # Submission command for Lemaitre3
78+ # Submission command for Lemaitre4
7979
8080# USAGE on cluster:
8181
@@ -109,7 +109,7 @@ Content of the `cpp_mriqc_group.slurm` file (download and edit from [here](cpp_m
109109On the cluster prompt, submit the jobs as:
110110
111111` ` ` bash
112- # Submission command for Lemaitre3
112+ # Submission command for Lemaitre4
113113
114114# USAGE on cluster:
115115
You can’t perform that action at this time.
0 commit comments