updated documentation

Author: pwrose

README.md

@@ -6,23 +6,25 @@ This repository is a supplement to the ["Ten Simple Rules for Reproducible Resea
 
 The example notebooks demonstrate some of rules. 
 
+In addition, we have setup [jupyter-guide](https://github.com/jupyter-guide/jupyter-guide) to crowdsource more technical and in-depth tutorials and to keep up with the rapidly evolving Jupyter ecosystem. We encourage you to contribute and share your expertise.
+
 ## Example 1
 This example demonstrates a reproducible 4-step workflow for predicting a protein fold classification using a Machine Learning approach.
 
 ---
 
-**Rule 9: Enable Your Notebooks to Be Read, Run, and Explored.** The nbviewer links below provide a non-interactive preview of notebooks and ![Binder](https://mybinder.org/badge.svg) buttons launch
-notebooks in your web browser using the Binder ([mybinder.org](https://mybinder.org/)) server (may be slow!). The HTML links provide a permanent static record of the notebooks. All notebooks can also be launched directly from the links in the 0-Workflow.ipynb top-level notebook.
+**Rule 9: Design Your Notebooks to Be Read, Run, and Explored.** The nbviewer links below provide a non-interactive preview of notebooks and ![Binder](https://mybinder.org/badge_logo.svg) buttons launch
+Jupyter Notebook or Jupyter Lab in your web browser using the Binder ([mybinder.org](https://mybinder.org/)) server (may be slow!). (See the Binder website how to setup links to a Git repository.) The HTML links provide a permanent static record of the notebooks. All notebooks can also be launched directly from the links in the 0-Workflow.ipynb top-level notebook.
 
 ---
 
 | Nbviewer | Jupyter Notebook | Jupyter Lab | HTML |
 | ---      | --               | ---         | ---  |
-| [0-Workflow.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F0-Workflow.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/0-Workflow.html) |
-| [1-CreateDataset.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/1-CreateDataset.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F1-CreateDataset.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F1-CreateDataset.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/1-CreateDataset.html) |
-| [2-CalculateFeatures.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/2-CalculateFeatures.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F2-CalculateFeatures.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F2-CalculateFeatures.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/2-CalculateFeatures.html) |
-| [3-FitModel.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/3-FitModel.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F3-FitModel.ipynb) |[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F3-FitModel.ipynb)  | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/3-FitModel.html) |
-| [4-Predict.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/4-Predict.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F4-Predict.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F4-Predict.ipynb)| [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/4-Predict.html) |
+| [0-Workflow.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F0-Workflow.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/0-Workflow.html) |
+| [1-CreateDataset.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/1-CreateDataset.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F1-CreateDataset.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F1-CreateDataset.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/1-CreateDataset.html) |
+| [2-CalculateFeatures.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/2-CalculateFeatures.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F2-CalculateFeatures.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F2-CalculateFeatures.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/2-CalculateFeatures.html) |
+| [3-FitModel.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/3-FitModel.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F3-FitModel.ipynb) |[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F3-FitModel.ipynb)  | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/3-FitModel.html) |
+| [4-Predict.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example1/4-Predict.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example1%2F4-Predict.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example1%2F4-Predict.ipynb)| [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example1/4-Predict.html) |
 
 ---
 
@@ -36,6 +38,10 @@ This example demonstrates a reproducible 2-step workflow for simulating a phylog
 
 | Nbviewer | Jupyter Notebook | Jupyter Lab | HTML |
 | ---      | --               | ---         | ---  |
-| [0-Workflow.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F0-Workflow.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/0-Workflow.html) |
-| [1-SimulateTree.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/1-SimulateTree.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F1-SimulateTree.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F1-SimulateTree.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/1-SimulateTree.html) |
-| [2-SimulateSequences.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/2-SimulateSequences.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F2-SimulateSequences.ipynb) | [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F2-SimulateSequences.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/2-SimulateSequences.html) |
+| [0-Workflow.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F0-Workflow.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F0-Workflow.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/0-Workflow.html) |
+| [1-SimulateTree.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/1-SimulateTree.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F1-SimulateTree.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F1-SimulateTree.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/1-SimulateTree.html) |
+| [2-SimulateSequences.ipynb](https://nbviewer.jupyter.org/github/jupyter-guide/ten-rules-jupyter/blob/master/example2/2-SimulateSequences.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?filepath=example2%2F2-SimulateSequences.ipynb) | [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/jupyter-guide/ten-rules-jupyter/master?urlpath=lab/tree/example2%2F2-SimulateSequences.ipynb) | [HTML](https://rawgit.com/jupyter-guide/ten-rules-jupyter/master/example2/2-SimulateSequences.html) |
+
+
+## Contact Us
+If you encounter any problems with this repository, please report them [here](https://github.com/jupyter-guide/ten-rules-jupyter/issues).