Bot Updating Templated Files

Author: LinuxServer-CI

Jenkinsfile

@@ -56,7 +56,7 @@ pipeline {
           env.CODE_URL = 'https://github.com/' + env.LS_USER + '/' + env.LS_REPO + '/commit/' + env.GIT_COMMIT
           env.DOCKERHUB_LINK = 'https://hub.docker.com/r/' + env.DOCKERHUB_IMAGE + '/tags/'
           env.PULL_REQUEST = env.CHANGE_ID
-          env.TEMPLATED_FILES = 'Jenkinsfile README.md LICENSE .editorconfig ./.github/CONTRIBUTING.md ./.github/FUNDING.yml ./.github/ISSUE_TEMPLATE/config.yml ./.github/ISSUE_TEMPLATE/issue.bug.md ./.github/ISSUE_TEMPLATE/issue.feature.md ./.github/PULL_REQUEST_TEMPLATE.md ./.github/workflows/external_trigger_scheduler.yml ./.github/workflows/greetings.yml ./.github/workflows/package_trigger_scheduler.yml ./.github/workflows/stale.yml ./.github/workflows/external_trigger.yml ./.github/workflows/package_trigger.yml'
+          env.TEMPLATED_FILES = 'Jenkinsfile README.md LICENSE .editorconfig ./.github/CONTRIBUTING.md ./.github/FUNDING.yml ./.github/ISSUE_TEMPLATE/config.yml ./.github/ISSUE_TEMPLATE/issue.bug.md ./.github/ISSUE_TEMPLATE/issue.feature.md ./.github/PULL_REQUEST_TEMPLATE.md ./.github/workflows/external_trigger_scheduler.yml ./.github/workflows/greetings.yml ./.github/workflows/package_trigger_scheduler.yml ./.github/workflows/stale.yml ./.github/workflows/external_trigger.yml ./.github/workflows/package_trigger.yml ./root/etc/cont-init.d/99-deprecation'
         }
         script{
           env.LS_RELEASE_NUMBER = sh(
@@ -310,13 +310,15 @@ pipeline {
                 cd ${TEMPDIR}/docker-${CONTAINER_NAME}
                 mkdir -p ${TEMPDIR}/repo/${LS_REPO}/.github/workflows
                 mkdir -p ${TEMPDIR}/repo/${LS_REPO}/.github/ISSUE_TEMPLATE
+                mkdir -p ${TEMPDIR}/repo/${LS_REPO}/root/etc/cont-init.d
                 cp --parents ${TEMPLATED_FILES} ${TEMPDIR}/repo/${LS_REPO}/ || :
                 cd ${TEMPDIR}/repo/${LS_REPO}/
                 if ! grep -q '.jenkins-external' .gitignore 2>/dev/null; then
                   echo ".jenkins-external" >> .gitignore
                   git add .gitignore
                 fi
                 git add ${TEMPLATED_FILES}
+                git rm ${TEMPDIR}/repo/${LS_REPO}/.github/workflows/{external_trigger,external_trigger_scheduler,package_trigger,package_trigger_scheduler}.yml || :
                 git commit -m 'Bot Updating Templated Files'
                 git push https://LinuxServer-CI:${GITHUB_TOKEN}@github.com/${LS_USER}/${LS_REPO}.git --all
                 echo "true" > /tmp/${COMMIT_SHA}-${BUILD_NUMBER}