From 50e011ad9cc38d70dabc68338bb060839245976f Mon Sep 17 00:00:00 2001 From: Tayab Soomro Date: Sun, 1 Dec 2024 20:07:26 -0600 Subject: [PATCH] Update tutorials.rst Add `--minlen 1` to the `funannotate sort` command because otherwise it throws error --- docs/tutorials.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/tutorials.rst b/docs/tutorials.rst index 580e2ecb..2191d58a 100644 --- a/docs/tutorials.rst +++ b/docs/tutorials.rst @@ -43,7 +43,7 @@ For this walkthrough, lets assume you have stranded RNA-seq data from 3 differen .. code-block:: none - funannotate sort -i Spades.genome.cleaned.fa -b scaffold -o Spades.genome.cleaned.sorted.fa + funannotate sort --minlen 1 -i Spades.genome.cleaned.fa -b scaffold -o Spades.genome.cleaned.sorted.fa 3. Now we want to softmask the repetitive elements in the assembly.