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Merge pull request #62 from nmrML/Fix-ontology-metadata
This PR changes the prefered pefix to "nmrCV2025" to allow the side-by-side indexing with the old nmrCV version within the TIB Terminology Service. It also fixes the wrong datatype of some ontology metadata annotations.
2 parents e00223b + 06b00f9 commit 59d56b0

12 files changed

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-61
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diff_nmrCV1.1-nmrCV_2025-03-20.html

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@@ -160,6 +160,7 @@ <h4 class="status-header">Removed</h4>
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<li><span class="axiom"><a href="http://purl.org/dc/elements/1.1/title">title</a> "nuclear magnetic resonance CV"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrML/issues"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#documenter">documenter</a> "Daniel Schober"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#implements">implements</a> "https://github.com/nmrML/nmrML"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrML/tree/master/ontologies"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#mailing-list">mailing-list</a> "https://groups.google.com/forum/?hl=en#!forum/nmrml/join"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#maintainer">maintainer</a> "http://www.metabolomics-msi.org/
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<li><span class="axiom"><a href="http://purl.org/dc/terms/contributor">contributor</a> <a href="https://orcid.org/0000-0003-1144-3600">Annick Moing</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/contributor">contributor</a> <a href="https://orcid.org/0009-0001-5998-5030">Noura Rayya</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/created">created</a> "2025-03-20"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/license">license</a> <a href="https://creativecommons.org/publicdomain/mark/1.0/">&lt;https://creativecommons.org/publicdomain/mark/1.0/&gt;</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/references">references</a> "https://doi.org/10.1021/acs.analchem.7b02795"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/license">license</a> <a href="https://creativecommons.org/publicdomain/mark/1.0/">https://creativecommons.org/publicdomain/mark/1.0</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/references">references</a> <a href="https://doi.org/10.1021/acs.analchem.7b02795">https://doi.org/10.1021/acs.analchem.7b02795</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/dc/terms/title">title</a> "nuclear magnetic resonance CV"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/vocab/vann/preferredNamespacePrefix">preferredNamespacePrefix</a> "nmrCV"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrCV/issues"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrCV"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://purl.org/vocab/vann/preferredNamespacePrefix">preferredNamespacePrefix</a> "nmrCV2025"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrCV/issues"^^<a href="http://www.w3.org/2001/XMLSchema#anyURI">anyURI</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#implements">implements</a> <a href="https://github.com/nmrML/nmrML">nmrML</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrCV"^^<a href="http://www.w3.org/2001/XMLSchema#anyURI">anyURI</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#maintainer">maintainer</a> <a href="https://www.wikidata.org/wiki/Q96678459">NFDI4Chem</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#priorVersion">priorVersion</a> <a href="https://nmrml.org/cv/v1.1.0/nmrCV.owl">nmrCV.owl</a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#priorVersion">priorVersion</a> <a href="https://nmrml.org/cv/v1.1.0/nmrCV.owl">https://nmrml.org/cv/v1.1.0/nmrCV.owl</a></a></span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#versionInfo">versionInfo</a> "2.0_alpha"</span> <ul></ul> </li>
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<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#versionInfo">versionInfo</a> "2025-03-20"</span> <ul></ul> </li>
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</ul>

diff_nmrCV1.1-nmrCV_2025-03-20.md

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- [documenter](http://usefulinc.com/ns/doap#documenter) "Daniel Schober"^^[string](http://www.w3.org/2001/XMLSchema#string)
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- [implements](http://usefulinc.com/ns/doap#implements) "https://github.com/nmrML/nmrML"^^[string](http://www.w3.org/2001/XMLSchema#string)
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- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrML/tree/master/ontologies"^^[string](http://www.w3.org/2001/XMLSchema#string)
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- [mailing-list](http://usefulinc.com/ns/doap#mailing-list) "https://groups.google.com/forum/?hl=en#!forum/nmrml/join"^^[string](http://www.w3.org/2001/XMLSchema#string)
@@ -212,19 +214,21 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of
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- [license](http://purl.org/dc/terms/license) [<https://creativecommons.org/publicdomain/mark/1.0/>](https://creativecommons.org/publicdomain/mark/1.0/)
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- [references](http://purl.org/dc/terms/references) "https://doi.org/10.1021/acs.analchem.7b02795"
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- [references](http://purl.org/dc/terms/references) https://doi.org/10.1021/acs.analchem.7b0279
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- [title](http://purl.org/dc/terms/title) "nuclear magnetic resonance CV"
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- [preferredNamespacePrefix](http://purl.org/vocab/vann/preferredNamespacePrefix) "nmrCV"
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- [preferredNamespacePrefix](http://purl.org/vocab/vann/preferredNamespacePrefix) "nmrCV2025"
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- [bug-database](http://usefulinc.com/ns/doap#bug-database) "https://github.com/nmrML/nmrCV/issues"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
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- [bug-database](http://usefulinc.com/ns/doap#bug-database) "https://github.com/nmrML/nmrCV/issues"
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- [implements](http://usefulinc.com/ns/doap#implements) [nmrML](https://github.com/nmrML/nmrML)
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- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrCV"
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- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrCV"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
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- [maintainer](http://usefulinc.com/ns/doap#maintainer) [NFDI4Chem](https://www.wikidata.org/wiki/Q96678459)
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- [priorVersion](http://www.w3.org/2002/07/owl#priorVersion) [nmrCV.owl](https://nmrml.org/cv/v1.1.0/nmrCV.owl)
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- [priorVersion](http://www.w3.org/2002/07/owl#priorVersion) https://nmrml.org/cv/v1.1.0/nmrCV.owl
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- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2.0_alpha"
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nmrCV-base.obo

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@@ -31,15 +31,15 @@ property_value: dcterms:contributor https://orcid.org/0000-0003-1144-3600
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property_value: dcterms:contributor https://orcid.org/0009-0001-5998-5030
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property_value: dcterms:created "2025-03-20" xsd:string
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property_value: dcterms:license https://creativecommons.org/publicdomain/mark/1.0/
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property_value: dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" xsd:string
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property_value: dcterms:references https://doi.org/10.1021/acs.analchem.7b02795
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property_value: dcterms:title "nuclear magnetic resonance CV" xsd:string
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property_value: doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." xsd:string
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property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:string
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property_value: doap:implements "https://github.com/nmrML/nmrML" xsd:string
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property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:string
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property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:anyURI
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property_value: doap:implements https://github.com/nmrML/nmrML
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property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:anyURI
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property_value: doap:maintainer https://www.wikidata.org/wiki/Q96678459
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property_value: owl:priorVersion https://nmrml.org/cv/v1.1.0/nmrCV.owl
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property_value: owl:versionInfo "2.0_alpha" xsd:string
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property_value: owl:versionInfo "2025-03-20" xsd:string
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property_value: vann:preferredNamespacePrefix "nmrCV" xsd:string
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property_value: vann:preferredNamespacePrefix "nmrCV2025" xsd:string
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nmrCV-base.owl

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<dcterms:contributor rdf:resource="https://orcid.org/0009-0001-5998-5030"/>
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<dcterms:created>2025-03-20</dcterms:created>
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<dcterms:license rdf:resource="https://creativecommons.org/publicdomain/mark/1.0/"/>
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<dcterms:references>https://doi.org/10.1021/acs.analchem.7b02795</dcterms:references>
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<dcterms:references rdf:resource="https://doi.org/10.1021/acs.analchem.7b02795"/>
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<dcterms:title>nuclear magnetic resonance CV</dcterms:title>
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<vann:preferredNamespacePrefix>nmrCV</vann:preferredNamespacePrefix>
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<vann:preferredNamespacePrefix>nmrCV2025</vann:preferredNamespacePrefix>
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<doap:audience>This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments.</doap:audience>
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<doap:bug-database>https://github.com/nmrML/nmrCV/issues</doap:bug-database>
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<doap:implements>https://github.com/nmrML/nmrML</doap:implements>
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<doap:location>https://github.com/nmrML/nmrCV</doap:location>
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<doap:bug-database rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV/issues</doap:bug-database>
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<doap:implements rdf:resource="https://github.com/nmrML/nmrML"/>
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<doap:location rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV</doap:location>
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<doap:maintainer rdf:resource="https://www.wikidata.org/wiki/Q96678459"/>
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<owl:priorVersion rdf:resource="https://nmrml.org/cv/v1.1.0/nmrCV.owl"/>
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<owl:versionInfo>2.0_alpha</owl:versionInfo>

nmrCV-base.ttl

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<https://orcid.org/0009-0001-5998-5030> ;
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dcterms:created "2025-03-20" ;
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dcterms:license <https://creativecommons.org/publicdomain/mark/1.0/> ;
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dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" ;
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dcterms:references <https://doi.org/10.1021/acs.analchem.7b02795> ;
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dcterms:title "nuclear magnetic resonance CV" ;
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vann:preferredNamespacePrefix "nmrCV" ;
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vann:preferredNamespacePrefix "nmrCV2025" ;
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doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." ;
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doap:bug-database "https://github.com/nmrML/nmrCV/issues" ;
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doap:implements "https://github.com/nmrML/nmrML" ;
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doap:location "https://github.com/nmrML/nmrCV" ;
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doap:bug-database "https://github.com/nmrML/nmrCV/issues"^^xsd:anyURI ;
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doap:implements <https://github.com/nmrML/nmrML> ;
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doap:location "https://github.com/nmrML/nmrCV"^^xsd:anyURI ;
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doap:maintainer <https://www.wikidata.org/wiki/Q96678459> ;
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owl:priorVersion <https://nmrml.org/cv/v1.1.0/nmrCV.owl> ;
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nmrCV-full.obo

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property_value: dcterms:contributor https://orcid.org/0009-0001-5998-5030
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property_value: dcterms:created "2025-03-20" xsd:string
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property_value: dcterms:license https://creativecommons.org/publicdomain/mark/1.0/
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property_value: dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" xsd:string
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property_value: dcterms:references https://doi.org/10.1021/acs.analchem.7b02795
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property_value: dcterms:title "nuclear magnetic resonance CV" xsd:string
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property_value: doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." xsd:string
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property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:string
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property_value: doap:implements "https://github.com/nmrML/nmrML" xsd:string
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property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:string
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property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:anyURI
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property_value: doap:implements https://github.com/nmrML/nmrML
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property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:anyURI
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property_value: doap:maintainer https://www.wikidata.org/wiki/Q96678459
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property_value: owl:priorVersion https://nmrml.org/cv/v1.1.0/nmrCV.owl
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property_value: owl:versionInfo "2.0_alpha" xsd:string
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property_value: owl:versionInfo "2025-03-20" xsd:string
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property_value: vann:preferredNamespacePrefix "nmrCV" xsd:string
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property_value: vann:preferredNamespacePrefix "nmrCV2025" xsd:string
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[Term]
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id: BFO:0000001

nmrCV-full.owl

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<dcterms:contributor rdf:resource="https://orcid.org/0009-0001-5998-5030"/>
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<dcterms:created>2025-03-20</dcterms:created>
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<dcterms:license rdf:resource="https://creativecommons.org/publicdomain/mark/1.0/"/>
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<dcterms:references>https://doi.org/10.1021/acs.analchem.7b02795</dcterms:references>
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<dcterms:references rdf:resource="https://doi.org/10.1021/acs.analchem.7b02795"/>
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<dcterms:title>nuclear magnetic resonance CV</dcterms:title>
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<vann:preferredNamespacePrefix>nmrCV</vann:preferredNamespacePrefix>
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<vann:preferredNamespacePrefix>nmrCV2025</vann:preferredNamespacePrefix>
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<doap:audience>This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments.</doap:audience>
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<doap:bug-database>https://github.com/nmrML/nmrCV/issues</doap:bug-database>
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<doap:implements>https://github.com/nmrML/nmrML</doap:implements>
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<doap:location>https://github.com/nmrML/nmrCV</doap:location>
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<doap:bug-database rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV/issues</doap:bug-database>
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<doap:implements rdf:resource="https://github.com/nmrML/nmrML"/>
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<doap:location rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV</doap:location>
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<doap:maintainer rdf:resource="https://www.wikidata.org/wiki/Q96678459"/>
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<owl:priorVersion rdf:resource="https://nmrml.org/cv/v1.1.0/nmrCV.owl"/>
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<owl:versionInfo>2.0_alpha</owl:versionInfo>

nmrCV-full.ttl

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dcterms:created "2025-03-20" ;
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dcterms:license <https://creativecommons.org/publicdomain/mark/1.0/> ;
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dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" ;
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dcterms:references <https://doi.org/10.1021/acs.analchem.7b02795> ;
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dcterms:title "nuclear magnetic resonance CV" ;
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vann:preferredNamespacePrefix "nmrCV" ;
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vann:preferredNamespacePrefix "nmrCV2025" ;
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doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." ;
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doap:bug-database "https://github.com/nmrML/nmrCV/issues" ;
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doap:implements "https://github.com/nmrML/nmrML" ;
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doap:location "https://github.com/nmrML/nmrCV" ;
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doap:bug-database "https://github.com/nmrML/nmrCV/issues"^^xsd:anyURI ;
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doap:implements <https://github.com/nmrML/nmrML> ;
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doap:location "https://github.com/nmrML/nmrCV"^^xsd:anyURI ;
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doap:maintainer <https://www.wikidata.org/wiki/Q96678459> ;
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owl:priorVersion <https://nmrml.org/cv/v1.1.0/nmrCV.owl> ;
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owl:versionInfo "2.0_alpha" ,

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