diff --git a/generate_simulate_data/processing_data.ipynb b/generate_simulate_data/processing_data.ipynb index c674bdf..8ed3547 100644 --- a/generate_simulate_data/processing_data.ipynb +++ b/generate_simulate_data/processing_data.ipynb @@ -226,8 +226,8 @@ " library_id = \"tissue\"\n", " adata.uns[spatial_key] = {library_id: {}}\n", " \n", - " sc.pp.normalize_total(adata)\n", - " sc.pp.log1p(adata)\n", + " #sc.pp.normalize_total(adata)\n", + " #sc.pp.log1p(adata)\n", " \n", " adata.write_h5ad(f'{input_dir}/{dataset}.h5ad')" ]