Runner configuration is not initialized properly

[GenyoNguyen]

I tried to setup quarto with molten codeRunner config using either lazy.nvim's opts keyword or explicitly calling the setup function but calling the runner used the default one, which is slime.

I checked runner/init.lua file and I saw that the configurations are initialized with the default config as a local variable only once at the beginning of the file so I assumed that after setting up with custom config, it isn't auto updated.

I am not sure if this is the reason because I cannot find any issues relating to such a simple problem like this. Therefore, I need someone to test it out to see if the issue also occurs in your case.

Here are my setups:

Loading using opts keyword:

	{
		"quarto-dev/quarto-nvim",
		dependencies = {
			"jmbuhr/otter.nvim",
			"nvim-treesitter/nvim-treesitter",
		},
		ft = { "quarto", "markdown" },
		opts = {
			lspFeatures = {
				languages = { "r", "python" },
				chunks = "all",
				diagnostics = {
					enabled = true,
					triggers = { "BufWritePost" },
				},
				completion = {
					enabled = true,
				},
			},
			keymap = {
				hover = "H",
				definition = "gd",
				rename = "<leader>rn",
				references = "gr",
				format = "<leader>gf",
			},
			codeRunner = {
				enabled = true,
				default_method = "molten",
			},
		},
		config = function()
			local runner = require("quarto.runner")
			vim.keymap.set("n", "<localleader>rc", runner.run_cell, { desc = "run cell", silent = true })
			vim.keymap.set("n", "<localleader>ra", runner.run_above, { desc = "run cell and above", silent = true })
			vim.keymap.set("n", "<localleader>rA", runner.run_all, { desc = "run all cells", silent = true })
			vim.keymap.set("n", "<localleader>rl", runner.run_line, { desc = "run line", silent = true })
			vim.keymap.set("v", "<localleader>r", runner.run_range, { desc = "run visual range", silent = true })
			vim.keymap.set("n", "<localleader>RA", function()
				runner.run_all(true)
			end, { desc = "run all cells of all languages", silent = true })
		end,
	},

Loading by calling setup function:

	{
		"quarto-dev/quarto-nvim",
		dependencies = {
			"jmbuhr/otter.nvim",
			"nvim-treesitter/nvim-treesitter",
		},
		ft = { "quarto", "markdown" },
		config = function()
			local runner = require("quarto.runner")
			vim.keymap.set("n", "<localleader>rc", runner.run_cell, { desc = "run cell", silent = true })
			vim.keymap.set("n", "<localleader>ra", runner.run_above, { desc = "run cell and above", silent = true })
			vim.keymap.set("n", "<localleader>rA", runner.run_all, { desc = "run all cells", silent = true })
			vim.keymap.set("n", "<localleader>rl", runner.run_line, { desc = "run line", silent = true })
			vim.keymap.set("v", "<localleader>r", runner.run_range, { desc = "run visual range", silent = true })
			vim.keymap.set("n", "<localleader>RA", function()
				runner.run_all(true)
			end, { desc = "run all cells of all languages", silent = true })
			require("quarto").setup({
				lspFeatures = {
					languages = { "r", "python" },
					chunks = "all",
					diagnostics = {
						enabled = true,
						triggers = { "BufWritePost" },
					},
					completion = {
						enabled = true,
					},
				},
				keymap = {
					hover = "H",
					definition = "gd",
					rename = "<leader>rn",
					references = "gr",
					format = "<leader>gf",
				},
				codeRunner = {
					enabled = true,
					default_method = "molten",
				},
			})
		end,
	},