test: reduce simulation time in test

Author: wangl-cc

example/competition.jl

@@ -5,7 +5,7 @@ using LoopVectorization
 using EvolutionaryModelingTools
 using EvolutionaryModelingTools: sample
 
-const T = 100.0
+const T = 10.0
 const r = 0.5
 const K = 100
 const μ = 0.01

example/logistic.jl

@@ -4,7 +4,7 @@ using EvolutionaryModelingTools
 using EvolutionaryModelingTools.Scalar
 
 # parameters
-const T = 100.0 # max time
+const T = 10.0 # max time
 const r = 0.5   # growth rate
 const d = 0.1   # death rate
 const K = 100   # carrying capacity

example/sir.jl

@@ -6,7 +6,7 @@ using EvolutionaryModelingTools.Scalar
 # parameters
 const T = 10.0
 const β = 0.005
-const ν = 0.1
+const ν = 0.01
 const α = 0.2
 const r = 0.5
 const d = 0.1

test/example/competition.jl

@@ -4,10 +4,10 @@ using Test
 
 include("../../example/competition.jl")
 
-g_result = run_gillespie(MersenneTwister(1), (0.0, 100.0))[1]
-g_result_rec = run_gillespie_record(MersenneTwister(1))[1]
-m_result = run_manually(MersenneTwister(1))
-m_result_rec = run_manually_record(MersenneTwister(1))
+g_result = run_gillespie(MersenneTwister(1), (0.0, T))[1]
+g_result_rec = run_gillespie_record(MersenneTwister(1), T)[1]
+m_result = run_manually(MersenneTwister(1), T)
+m_result_rec = run_manually_record(MersenneTwister(1), T)
 
 @test g_result.v == g_result_rec.v == m_result.v == m_result_rec.v
 @test g_result.m == g_result_rec.m == m_result.m == m_result_rec.m

test/example/logistic.jl

@@ -4,10 +4,10 @@ using Test
 
 include("../../example/logistic.jl")
 
-g_result = run_gillespie(MersenneTwister(1))[1].n
-g_result_record = run_gillespie_record(MersenneTwister(1))[1].n
+g_result = run_gillespie(MersenneTwister(1), T)[1].n
+g_result_record = run_gillespie_record(MersenneTwister(1), T)[1].n
 m_result = run_manually(MersenneTwister(1))
-m_result_record = run_manually_record(MersenneTwister(1))
+m_result_record = run_manually_record(MersenneTwister(1), T)
 
 @test g_result == g_result_record == m_result == m_result_record
 e1 = getentries(g_result_record)

test/example/sir.jl

@@ -4,10 +4,10 @@ using Test
 
 include("../../example/sir.jl")
 
-g_result = run_gillespie(MersenneTwister(1), (0.0, 100.0))[1]
-g_result_rec = run_gillespie_record(MersenneTwister(1))[1]
-m_result = run_manually(MersenneTwister(1))
-m_result_rec = run_manually_record(MersenneTwister(1))
+g_result = run_gillespie(MersenneTwister(1), (0.0, T))[1]
+g_result_rec = run_gillespie_record(MersenneTwister(1), T)[1]
+m_result = run_manually(MersenneTwister(1), T)
+m_result_rec = run_manually_record(MersenneTwister(1), T)
 
 for sym in (:S, :I, :R)
     @eval @test g_result.$sym == g_result_rec.$sym == m_result.$sym == m_result_rec.$sym