Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
55 changes: 55 additions & 0 deletions ilastik/1.4.1/Dockerfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,55 @@
FROM ubuntu:22.04

LABEL base_image="ubuntu:22.04"
LABEL version="1"
LABEL software="ilastik"
LABEL software.version="1.4.1"
LABEL about.summary="the interactive learning and segmentation toolkit"
LABEL about.home="https://ilastik.org"
LABEL about.license="GPL-2.0-or-later"
LABEL about.license_file="https://github.com/ilastik/ilastik/blob/main/LICENSE"
LABEL about.documentation="https://ilastik.org/documentation/index.html"
LABEL extra.identifiers.biotools=ilastik


MAINTAINER Yi Sun <sunyi000@gmail.com>


ARG DEBIAN_FRONTEND="noninteractive"
ARG ILASTIK_VERSION="1.4.1"

ENV LANG=en_US.UTF-8 \
LC_ALL=en_US.UTF-8 \
LANGUAGE=en_US:en \
QT_XCB_NO_MITSHM=1 \
LAZYFLOW_THREADS=2 \
LAZYFLOW_TOTAL_RAM_MB=32000 \
NUMBA_CACHE_DIR=/tmp/numba_cache \
BIOIMAGEIO_CACHE_PATH="/tmp/pybio_cache" \
PATH="/opt/ilastik-$ILASTIK_VERSION-Linux:$PATH"

RUN apt-get update -qq && \
apt-get install -y \
apt-utils \
locales \
build-essential \
libglu1-mesa-dev \
qtcreator \
libgl1-mesa-glx \
nautilus \
xdg-utils \
wget && \
apt-get clean && \
rm -rf /var/lib/apt/lists/*


RUN sed -i '/en_US.UTF-8/s/^# //g' /etc/locale.gen && \
locale-gen

WORKDIR /opt/
RUN wget https://files.ilastik.org/ilastik-1.4.1-Linux.tar.bz2 && \
tar xjf ilastik-1.*-Linux.tar.bz2 && \
rm -f ilastik-1.*-Linux.tar.bz2


#ENTRYPOINT["run_ilastik.sh"]
1 change: 1 addition & 0 deletions ilastik/1.4.1/test-cmds.txt
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
/opt/ilastik-1.4.1-Linux/run_ilastik.sh --headless --version