Fix-threads-logs #4
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…ting without modifying git every time
…n config, some others half or 1 thread alone in rules requiring no multithreading
…ed some shell commands
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Several fixes applied to improve computer core usage, snakemake usability and cleanness of github repository. A summary of the changes below:
flye,minimap2,samtoolsandracon)..gitignoreand removed .snakemake/ files commited to repositoryHope someone finds this helpful!
*disclaimer: I just tested the pacbio longread type case, but I see no reason why it will not work in the other workflows.