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remove dependancy to getZarrArrayPath #10

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Merged
Artur-man merged 1 commit into from
May 22, 2025
Merged

remove dependancy to getZarrArrayPath #10

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2 changes: 1 addition & 1 deletion NAMESPACE
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Original file line number Diff line number Diff line change
Expand Up @@ -9,13 +9,13 @@ exportMethods(rotate)
exportMethods(scale)
exportMethods(translation)
import(SpatialData)
importFrom(DelayedArray,path)
importFrom(DelayedArray,realize)
importFrom(Rarr,zarr_overview)
importFrom(S4Vectors,metadata)
importFrom(SingleCellExperiment,int_colData)
importFrom(SingleCellExperiment,int_metadata)
importFrom(SpatialData,channels)
importFrom(SpatialData,getZarrArrayPath)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(ggforce,geom_circle)
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4 changes: 2 additions & 2 deletions R/plotImage.R
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Expand Up @@ -103,11 +103,11 @@ plotSpatialData <- \() ggplot() + scale_y_reverse() + .theme
}

# check if an image is rgb or not
#' @importFrom SpatialData getZarrArrayPath
#' @importFrom DelayedArray path
#' @importFrom Rarr zarr_overview
#' @noRd
.get_img_dt <- \(a) {
pa <- getZarrArrayPath(a)
pa <- DelayedArray::path(a)
df <- zarr_overview(pa, as_data_frame=TRUE)
if (!is.null(dt <- df$data_type)) return(dt)
}
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