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update GHA for bioc devel #11

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Merged
Artur-man merged 1 commit into from
May 22, 2025
Merged

update GHA for bioc devel #11

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16 changes: 8 additions & 8 deletions .github/workflows/check-bioc.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -52,9 +52,9 @@ jobs:
fail-fast: false
matrix:
config:
- { os: ubuntu-latest, r: '4.4', bioc: '3.20', cont: "bioconductor/bioconductor_docker:RELEASE_3_20", rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" }
# - { os: macOS-latest, r: '4.4', bioc: '3.20'}
# - { os: windows-latest, r: '4.4', bioc: '3.20'}
- { os: ubuntu-latest, r: '4.5', bioc: 'devel', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" }
# - { os: macOS-latest, r: '4.5', bioc: 'devel'}
# - { os: windows-latest, r: '4.5', bioc: 'devel'}
## Check https://github.com/r-lib/actions/tree/master/examples
## for examples using the http-user-agent
env:
Expand Down Expand Up @@ -105,16 +105,16 @@ jobs:
uses: actions/cache@v3
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ env.cache-version }}-${{ runner.os }}-biocversion-RELEASE_3_20-r-4.4-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ env.cache-version }}-${{ runner.os }}-biocversion-RELEASE_3_20-r-4.4-
key: ${{ env.cache-version }}-${{ runner.os }}-biocversion-devel-r-4.5-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ env.cache-version }}-${{ runner.os }}-biocversion-devel-r-4.5-

- name: Cache R packages on Linux
if: "!contains(github.event.head_commit.message, '/nocache') && runner.os == 'Linux' "
uses: actions/cache@v3
with:
path: /home/runner/work/_temp/Library
key: ${{ env.cache-version }}-${{ runner.os }}-biocversion-RELEASE_3_20-r-4.4-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ env.cache-version }}-${{ runner.os }}-biocversion-RELEASE_3_20-r-4.4-
key: ${{ env.cache-version }}-${{ runner.os }}-biocversion-devel-r-4.5-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ env.cache-version }}-${{ runner.os }}-biocversion-devel-r-4.5-

# - name: Install Linux system dependencies
# if: runner.os == 'Linux'
Expand Down Expand Up @@ -285,7 +285,7 @@ jobs:
if: failure()
uses: actions/upload-artifact@master
with:
name: ${{ runner.os }}-biocversion-RELEASE_3_20-r-4.4-results
name: ${{ runner.os }}-biocversion-devel-r-4.5-results
path: check


Expand Down