add scripts for the parameter search with cluster at IPMU

scripts/test_ipmu_gw/gw_queue_check_various_mps.sh

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+#!/bin/bash
+
+# The shell script which interprets this job script.
+# Any option for qsub can be described like this,
+# with #PBS
+#PBS -S /bin/bash
+
+
+# Merge STDERR to STDOUT
+#PBS -j oe
+
+# Path of the redirect of STDOUT by the batch job.
+#PBS -o check_various_mps_sampled_case5_test_result
+
+# No mail will be sent for the job.
+#PBS -m p
+
+#PBS -l nodes=1:ppn=28
+#PBS -l walltime=72:00:00
+
+# Name of queue;
+# run qmgr -c "p s" to get the list of available queues.
+#PBS -q mini
+
+# Name of the job
+# - within 15 characters length,
+# - without white space characters,
+# - and with the first character alphabetic.
+# It is shown in the list which "qstat" generates
+#PBS -N sampled_case5_test
+
+cd /work/kiyoyabe/pfs/survey_simulations/scripts/check_netflow_processing_time_201905/scripts
+source /home/kiyoyabe/gurobi/gurobi_811.env
+
+
+# example (changing MIPFocus from 0 to 3)
+rm -f ../logs/idl_ge_single_sampled_case5_fixed_net_test_mipfocus?_seed??.log
+
+./run_gurobi_cl.sh -m idl_ge_single_unsampled_case5_fixed_net.mps -l idl_ge_single_sampled_case5_fixed_net_test_mipfocus0 -g 0.01 -t 28 -p 2 -e 4 -d 0 -r 0.8 -f 0 -c -1 -n 5
+./run_gurobi_cl.sh -m idl_ge_single_unsampled_case5_fixed_net.mps -l idl_ge_single_sampled_case5_fixed_net_test_mipfocus1 -g 0.01 -t 28 -p 2 -e 4 -d 0 -r 0.8 -f 1 -c -1 -n 5
+./run_gurobi_cl.sh -m idl_ge_single_unsampled_case5_fixed_net.mps -l idl_ge_single_sampled_case5_fixed_net_test_mipfocus2 -g 0.01 -t 28 -p 2 -e 4 -d 0 -r 0.8 -f 2 -c -1 -n 5
+./run_gurobi_cl.sh -m idl_ge_single_unsampled_case5_fixed_net.mps -l idl_ge_single_sampled_case5_fixed_net_test_mipfocus3 -g 0.01 -t 28 -p 2 -e 4 -d 0 -r 0.8 -f 3 -c -1 -n 5
+
+# for options for run_gurobi_cl.sh, run ./run_gurobi_cl.sh -h

scripts/test_ipmu_gw/run_gurobi_cl.sh

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+#!/bin/bash
+
+function usage {
+
+  cat <<EOM
+Usage: $(basename "$0") [OPTION]...
+
+  -m <MPS FILENAME>  : MPS FILE NAME
+  -l <LOG NAME>      : LOG NAME for LOGFILE
+  -g <MIPGap>        : MIPGap value        (default:0.01)
+  -t <Threads>       : Number of Threads   (default:28)
+  -p <Presolve>      : Presolve            (default:-1)
+  -e <Method>        : Method              (default:-1)
+  -d <DegenMoves>    : DegenMoves          (default:-1)
+  -r <Heuristics>    : Heuristics          (default:0.05)
+  -f <MIPFocus>      : MIPFocus            (default:0)
+  -c <Cuts>          : Cuts                (default:-1)
+  -n <Nseed>         : Number of seeds     (default:5)
+  -h                 : Display help
+EOM
+
+  exit 2
+}
+
+
+mps_dir=../data/
+log_dir=../logs/
+
+# init parameters
+
+mps=idl_ge_single_sampled_case1_fixed_net.mps
+logname=idl_ge_single_sampled_case1_fixed_net_fiducial
+mipgap=0.01
+threads=28
+presolve=-1
+method=-1
+degenmoves=-1
+heuristics=0.05
+mipfocus=0
+cuts=-1
+nseed=5
+
+while getopts "m:l:g:t:p:e:d:r:f:c:n:" optKey; do
+  case "$optKey" in
+    m)
+      mps=$OPTARG
+      ;;
+    l)
+      logname=$OPTARG
+      ;;
+    g)
+      mipgap=$OPTARG
+      ;;
+    t)
+      threads=$OPTARG
+      ;;
+    p)
+      presolve=$OPTARG
+      ;;
+    e)
+      method=$OPTARG
+      ;;
+    d)
+      degenmoves=$OPTARG
+      ;;
+    r)
+      heuristics=$OPTARG
+      ;;
+    f)
+      mipfocus=$OPTARG
+      ;;
+    c)
+      cuts=$OPTARG
+      ;;
+    n)
+      nseed=$OPTARG
+      ;;	
+    h|*)
+      usage
+      ;;
+  esac
+done
+
+for seed in `seq -f %02g 1 $nseed`
+do 
+  arguments="MIPGap=$mipgap Threads=$threads Seed=$seed Presolve=$presolve Method=$method DegenMoves=$degenmoves Heuristics=$heuristics MIPFocus=$mipfocus Cuts=$cuts LogFile=$log_dir${logname}_seed$seed.log ${mps_dir}$mps"
+  command="gurobi_cl $arguments " 
+  echo $command
+  $command
+done