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Achievement: QuickdrawAchievement: Pull SharkAchievement: Arctic Code Vault ContributorAchievement: Starstruck

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  1. wgd wgd Public

    Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche-psb/wgd.

    Python 86 42

  2. Whale.jl Whale.jl Public

    Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation

    Julia 16 5

  3. NewickTree.jl NewickTree.jl Public

    Newick formatted (phylogenetic) trees

    Julia 8 4

  4. DeadBird.jl DeadBird.jl Public

    Statistical analysis of comparative genomic data using phylogenetic birth-death process models

    Julia 2

  5. Fwd Fwd Public

    Forward popgen simulation in julia

    Julia