Stabilize CI matrix and pin NumPy baseline to 1.26.4#855

Merged

jonbrenas merged 13 commits intomalariagen:masterfrom

adilraza99:fix-numpy-slicing-compat

Feb 8, 2026

Commits on Feb 2, 2026

fix: replace strided slicing with out= for NumPy 2.x compatibility
adilraza99
committed
fix: resolve NumPy 2.x boolean ambiguity in SNP frequency analysis
adilraza99
committed
fix: resolve NumPy 2.x boolean ambiguity in isel slicing paths
adilraza99
committed

Commits on Feb 3, 2026

Fix NumPy 2.x boolean indexing in hap_data and cnv_data filters
adilraza99
committed

Commits on Feb 4, 2026