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StroemPhi merged 2 commits into from
Mar 26, 2025
Merged

Fix ontology metadata #62

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0fac5d6
Change preferred prefix to "nmrCV2025" to allow side-by-side indexein…
StroemPhi Mar 26, 2025
06b00f9
Fix wrong datatypes in ontology metadata annotations
StroemPhi Mar 26, 2025
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14 changes: 8 additions & 6 deletions diff_nmrCV1.1-nmrCV_2025-03-20.html
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Expand Up @@ -160,6 +160,7 @@ <h4 class="status-header">Removed</h4>
<li><span class="axiom"><a href="http://purl.org/dc/elements/1.1/title">title</a> "nuclear magnetic resonance CV"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrML/issues"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#documenter">documenter</a> "Daniel Schober"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#implements">implements</a> "https://github.com/nmrML/nmrML"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrML/tree/master/ontologies"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#mailing-list">mailing-list</a> "https://groups.google.com/forum/?hl=en#!forum/nmrml/join"^^<a href="http://www.w3.org/2001/XMLSchema#string">string</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#maintainer">maintainer</a> "http://www.metabolomics-msi.org/
Expand Down Expand Up @@ -205,14 +206,15 @@ <h4 class="status-header">Added</h4>
<li><span class="axiom"><a href="http://purl.org/dc/terms/contributor">contributor</a> <a href="https://orcid.org/0000-0003-1144-3600">Annick Moing</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/contributor">contributor</a> <a href="https://orcid.org/0009-0001-5998-5030">Noura Rayya</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/created">created</a> "2025-03-20"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/license">license</a> <a href="https://creativecommons.org/publicdomain/mark/1.0/">&lt;https://creativecommons.org/publicdomain/mark/1.0/&gt;</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/references">references</a> "https://doi.org/10.1021/acs.analchem.7b02795"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/license">license</a> <a href="https://creativecommons.org/publicdomain/mark/1.0/">https://creativecommons.org/publicdomain/mark/1.0</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/references">references</a> <a href="https://doi.org/10.1021/acs.analchem.7b02795">https://doi.org/10.1021/acs.analchem.7b02795</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/dc/terms/title">title</a> "nuclear magnetic resonance CV"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/vocab/vann/preferredNamespacePrefix">preferredNamespacePrefix</a> "nmrCV"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrCV/issues"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrCV"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://purl.org/vocab/vann/preferredNamespacePrefix">preferredNamespacePrefix</a> "nmrCV2025"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#bug-database">bug-database</a> "https://github.com/nmrML/nmrCV/issues"^^<a href="http://www.w3.org/2001/XMLSchema#anyURI">anyURI</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#implements">implements</a> <a href="https://github.com/nmrML/nmrML">nmrML</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#location">location</a> "https://github.com/nmrML/nmrCV"^^<a href="http://www.w3.org/2001/XMLSchema#anyURI">anyURI</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://usefulinc.com/ns/doap#maintainer">maintainer</a> <a href="https://www.wikidata.org/wiki/Q96678459">NFDI4Chem</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#priorVersion">priorVersion</a> <a href="https://nmrml.org/cv/v1.1.0/nmrCV.owl">nmrCV.owl</a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#priorVersion">priorVersion</a> <a href="https://nmrml.org/cv/v1.1.0/nmrCV.owl">https://nmrml.org/cv/v1.1.0/nmrCV.owl</a></a></span> <ul></ul> </li>
<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#versionInfo">versionInfo</a> "2.0_alpha"</span> <ul></ul> </li>
<li><span class="axiom"><a href="http://www.w3.org/2002/07/owl#versionInfo">versionInfo</a> "2025-03-20"</span> <ul></ul> </li>
</ul>
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14 changes: 9 additions & 5 deletions diff_nmrCV1.1-nmrCV_2025-03-20.md
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Expand Up @@ -138,6 +138,8 @@ MIME type application/rdf+xml

- [documenter](http://usefulinc.com/ns/doap#documenter) "Daniel Schober"^^[string](http://www.w3.org/2001/XMLSchema#string)

- [implements](http://usefulinc.com/ns/doap#implements) "https://github.com/nmrML/nmrML"^^[string](http://www.w3.org/2001/XMLSchema#string)

- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrML/tree/master/ontologies"^^[string](http://www.w3.org/2001/XMLSchema#string)

- [mailing-list](http://usefulinc.com/ns/doap#mailing-list) "https://groups.google.com/forum/?hl=en#!forum/nmrml/join"^^[string](http://www.w3.org/2001/XMLSchema#string)
Expand Down Expand Up @@ -212,19 +214,21 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of

- [license](http://purl.org/dc/terms/license) [<https://creativecommons.org/publicdomain/mark/1.0/>](https://creativecommons.org/publicdomain/mark/1.0/)

- [references](http://purl.org/dc/terms/references) "https://doi.org/10.1021/acs.analchem.7b02795"
- [references](http://purl.org/dc/terms/references) https://doi.org/10.1021/acs.analchem.7b0279

- [title](http://purl.org/dc/terms/title) "nuclear magnetic resonance CV"

- [preferredNamespacePrefix](http://purl.org/vocab/vann/preferredNamespacePrefix) "nmrCV"
- [preferredNamespacePrefix](http://purl.org/vocab/vann/preferredNamespacePrefix) "nmrCV2025"

- [bug-database](http://usefulinc.com/ns/doap#bug-database) "https://github.com/nmrML/nmrCV/issues"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

- [bug-database](http://usefulinc.com/ns/doap#bug-database) "https://github.com/nmrML/nmrCV/issues"
- [implements](http://usefulinc.com/ns/doap#implements) [nmrML](https://github.com/nmrML/nmrML)

- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrCV"
- [location](http://usefulinc.com/ns/doap#location) "https://github.com/nmrML/nmrCV"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

- [maintainer](http://usefulinc.com/ns/doap#maintainer) [NFDI4Chem](https://www.wikidata.org/wiki/Q96678459)

- [priorVersion](http://www.w3.org/2002/07/owl#priorVersion) [nmrCV.owl](https://nmrml.org/cv/v1.1.0/nmrCV.owl)
- [priorVersion](http://www.w3.org/2002/07/owl#priorVersion) https://nmrml.org/cv/v1.1.0/nmrCV.owl

- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2.0_alpha"

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10 changes: 5 additions & 5 deletions nmrCV-base.obo
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Expand Up @@ -31,15 +31,15 @@ property_value: dcterms:contributor https://orcid.org/0000-0003-1144-3600
property_value: dcterms:contributor https://orcid.org/0009-0001-5998-5030
property_value: dcterms:created "2025-03-20" xsd:string
property_value: dcterms:license https://creativecommons.org/publicdomain/mark/1.0/
property_value: dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" xsd:string
property_value: dcterms:references https://doi.org/10.1021/acs.analchem.7b02795
property_value: dcterms:title "nuclear magnetic resonance CV" xsd:string
property_value: doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." xsd:string
property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:string
property_value: doap:implements "https://github.com/nmrML/nmrML" xsd:string
property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:string
property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:anyURI
property_value: doap:implements https://github.com/nmrML/nmrML
property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:anyURI
property_value: doap:maintainer https://www.wikidata.org/wiki/Q96678459
property_value: owl:priorVersion https://nmrml.org/cv/v1.1.0/nmrCV.owl
property_value: owl:versionInfo "2.0_alpha" xsd:string
property_value: owl:versionInfo "2025-03-20" xsd:string
property_value: vann:preferredNamespacePrefix "nmrCV" xsd:string
property_value: vann:preferredNamespacePrefix "nmrCV2025" xsd:string

10 changes: 5 additions & 5 deletions nmrCV-base.owl
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Expand Up @@ -46,13 +46,13 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of
<dcterms:contributor rdf:resource="https://orcid.org/0009-0001-5998-5030"/>
<dcterms:created>2025-03-20</dcterms:created>
<dcterms:license rdf:resource="https://creativecommons.org/publicdomain/mark/1.0/"/>
<dcterms:references>https://doi.org/10.1021/acs.analchem.7b02795</dcterms:references>
<dcterms:references rdf:resource="https://doi.org/10.1021/acs.analchem.7b02795"/>
<dcterms:title>nuclear magnetic resonance CV</dcterms:title>
<vann:preferredNamespacePrefix>nmrCV</vann:preferredNamespacePrefix>
<vann:preferredNamespacePrefix>nmrCV2025</vann:preferredNamespacePrefix>
<doap:audience>This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments.</doap:audience>
<doap:bug-database>https://github.com/nmrML/nmrCV/issues</doap:bug-database>
<doap:implements>https://github.com/nmrML/nmrML</doap:implements>
<doap:location>https://github.com/nmrML/nmrCV</doap:location>
<doap:bug-database rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV/issues</doap:bug-database>
<doap:implements rdf:resource="https://github.com/nmrML/nmrML"/>
<doap:location rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV</doap:location>
<doap:maintainer rdf:resource="https://www.wikidata.org/wiki/Q96678459"/>
<owl:priorVersion rdf:resource="https://nmrml.org/cv/v1.1.0/nmrCV.owl"/>
<owl:versionInfo>2.0_alpha</owl:versionInfo>
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10 changes: 5 additions & 5 deletions nmrCV-base.ttl
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Expand Up @@ -46,13 +46,13 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of
<https://orcid.org/0009-0001-5998-5030> ;
dcterms:created "2025-03-20" ;
dcterms:license <https://creativecommons.org/publicdomain/mark/1.0/> ;
dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" ;
dcterms:references <https://doi.org/10.1021/acs.analchem.7b02795> ;
dcterms:title "nuclear magnetic resonance CV" ;
vann:preferredNamespacePrefix "nmrCV" ;
vann:preferredNamespacePrefix "nmrCV2025" ;
doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." ;
doap:bug-database "https://github.com/nmrML/nmrCV/issues" ;
doap:implements "https://github.com/nmrML/nmrML" ;
doap:location "https://github.com/nmrML/nmrCV" ;
doap:bug-database "https://github.com/nmrML/nmrCV/issues"^^xsd:anyURI ;
doap:implements <https://github.com/nmrML/nmrML> ;
doap:location "https://github.com/nmrML/nmrCV"^^xsd:anyURI ;
doap:maintainer <https://www.wikidata.org/wiki/Q96678459> ;
owl:priorVersion <https://nmrml.org/cv/v1.1.0/nmrCV.owl> ;
owl:versionInfo "2.0_alpha" ,
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10 changes: 5 additions & 5 deletions nmrCV-full.obo
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Expand Up @@ -55,17 +55,17 @@ property_value: dcterms:contributor https://orcid.org/0000-0003-1144-3600
property_value: dcterms:contributor https://orcid.org/0009-0001-5998-5030
property_value: dcterms:created "2025-03-20" xsd:string
property_value: dcterms:license https://creativecommons.org/publicdomain/mark/1.0/
property_value: dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" xsd:string
property_value: dcterms:references https://doi.org/10.1021/acs.analchem.7b02795
property_value: dcterms:title "nuclear magnetic resonance CV" xsd:string
property_value: doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." xsd:string
property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:string
property_value: doap:implements "https://github.com/nmrML/nmrML" xsd:string
property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:string
property_value: doap:bug-database "https://github.com/nmrML/nmrCV/issues" xsd:anyURI
property_value: doap:implements https://github.com/nmrML/nmrML
property_value: doap:location "https://github.com/nmrML/nmrCV" xsd:anyURI
property_value: doap:maintainer https://www.wikidata.org/wiki/Q96678459
property_value: owl:priorVersion https://nmrml.org/cv/v1.1.0/nmrCV.owl
property_value: owl:versionInfo "2.0_alpha" xsd:string
property_value: owl:versionInfo "2025-03-20" xsd:string
property_value: vann:preferredNamespacePrefix "nmrCV" xsd:string
property_value: vann:preferredNamespacePrefix "nmrCV2025" xsd:string

[Term]
id: BFO:0000001
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10 changes: 5 additions & 5 deletions nmrCV-full.owl
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Expand Up @@ -53,13 +53,13 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of
<dcterms:contributor rdf:resource="https://orcid.org/0009-0001-5998-5030"/>
<dcterms:created>2025-03-20</dcterms:created>
<dcterms:license rdf:resource="https://creativecommons.org/publicdomain/mark/1.0/"/>
<dcterms:references>https://doi.org/10.1021/acs.analchem.7b02795</dcterms:references>
<dcterms:references rdf:resource="https://doi.org/10.1021/acs.analchem.7b02795"/>
<dcterms:title>nuclear magnetic resonance CV</dcterms:title>
<vann:preferredNamespacePrefix>nmrCV</vann:preferredNamespacePrefix>
<vann:preferredNamespacePrefix>nmrCV2025</vann:preferredNamespacePrefix>
<doap:audience>This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments.</doap:audience>
<doap:bug-database>https://github.com/nmrML/nmrCV/issues</doap:bug-database>
<doap:implements>https://github.com/nmrML/nmrML</doap:implements>
<doap:location>https://github.com/nmrML/nmrCV</doap:location>
<doap:bug-database rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV/issues</doap:bug-database>
<doap:implements rdf:resource="https://github.com/nmrML/nmrML"/>
<doap:location rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/nmrML/nmrCV</doap:location>
<doap:maintainer rdf:resource="https://www.wikidata.org/wiki/Q96678459"/>
<owl:priorVersion rdf:resource="https://nmrml.org/cv/v1.1.0/nmrCV.owl"/>
<owl:versionInfo>2.0_alpha</owl:versionInfo>
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10 changes: 5 additions & 5 deletions nmrCV-full.ttl
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Expand Up @@ -53,13 +53,13 @@ The decision to build upon nmrCV v1.1.0 was based on its existing definition of
<https://orcid.org/0009-0001-5998-5030> ;
dcterms:created "2025-03-20" ;
dcterms:license <https://creativecommons.org/publicdomain/mark/1.0/> ;
dcterms:references "https://doi.org/10.1021/acs.analchem.7b02795" ;
dcterms:references <https://doi.org/10.1021/acs.analchem.7b02795> ;
dcterms:title "nuclear magnetic resonance CV" ;
vann:preferredNamespacePrefix "nmrCV" ;
vann:preferredNamespacePrefix "nmrCV2025" ;
doap:audience "This CV is to be used by metabolomics researchers, or basically any chenomics or proteomics researchers who apply the nmrML xml to store their NMRraw data in a vendor agnostic manner. But nmrML can also be used to capture experimental results and (limited) basic metadata like molecule to spectral feature assignments." ;
doap:bug-database "https://github.com/nmrML/nmrCV/issues" ;
doap:implements "https://github.com/nmrML/nmrML" ;
doap:location "https://github.com/nmrML/nmrCV" ;
doap:bug-database "https://github.com/nmrML/nmrCV/issues"^^xsd:anyURI ;
doap:implements <https://github.com/nmrML/nmrML> ;
doap:location "https://github.com/nmrML/nmrCV"^^xsd:anyURI ;
doap:maintainer <https://www.wikidata.org/wiki/Q96678459> ;
owl:priorVersion <https://nmrml.org/cv/v1.1.0/nmrCV.owl> ;
owl:versionInfo "2.0_alpha" ,
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