chore: Fix CI cleanup utility classpath issues

.cursor/commands/create-improvement.md

@@ -21,7 +21,7 @@ When the planned code changes are complete, the agent should take the following
    - Ensure changes are adequately tested
 
 2. **Create Pull Request**
-   - Create a PR in draft mode
+   - Create a PR
    - Rename the PR with a title that follows the Conventional Commits 1.0.0 format
    - Update the PR description with:
      - A clear description of the problem and solution

.env.example

@@ -0,0 +1,5 @@
+# Pinecone API Configuration
+# Copy this file to .env and fill in your actual API key
+# The .env file is gitignored and will not be committed
+
+PINECONE_API_KEY=your-api-key-here

.github/workflows/cleanup-test-resources.yml

@@ -14,7 +14,7 @@ on:
       age_threshold_days:
         description: 'Minimum age in days for resources to be deleted'
         required: false
-        default: '1'
+        default: 1
         type: number
       dry_run:
         description: 'Preview deletions without executing (dry-run mode)'
@@ -63,7 +63,9 @@ jobs:
           echo "Running cleanup with: $ARGS"
 
           # Run the cleanup utility
-          java -cp "build/libs/*:build/classes/java/main" \
+          # Use only the shadow JAR (-all.jar) which contains all dependencies
+          # This avoids classpath conflicts from mixing regular JAR, shadow JAR, and other artifacts
+          java -cp build/libs/*-all.jar \
             io.pinecone.helpers.IndexCleanupUtility $ARGS
 
       - name: Summary

.github/workflows/pr.yml

@@ -108,6 +108,6 @@ jobs:
       continue-on-error: true
       run: |
         echo "Running IndexCleanupUtility to clean up test indexes..."
-        java -cp "build/libs/*" io.pinecone.helpers.IndexCleanupUtility
+        java -cp build/libs/*-all.jar io.pinecone.helpers.IndexCleanupUtility
       env:
         PINECONE_API_KEY: ${{ secrets.PINECONE_API_KEY }}

.gitignore

@@ -81,4 +81,10 @@ nb-configuration.xml
 ##############################
 .DS_Store
 
+##############################
+## Environment Variables
+##############################
+.env
+.env.local
+
 gen

src/main/java/io/pinecone/helpers/IndexCleanupUtility.java

@@ -1,13 +1,15 @@
 package io.pinecone.helpers;
 
 import io.pinecone.clients.Pinecone;
+import okhttp3.OkHttpClient;
 import org.openapitools.db_control.client.model.CollectionList;
 import org.openapitools.db_control.client.model.CollectionModel;
 import org.openapitools.db_control.client.model.IndexList;
 import org.openapitools.db_control.client.model.IndexModel;
 
 import java.util.ArrayList;
 import java.util.List;
+import java.util.concurrent.TimeUnit;
 
 /**
  * Utility for cleaning up Pinecone indexes and collections.
@@ -65,7 +67,17 @@ public static void main(String[] args) {
                 System.exit(1);
             }
 
-            Pinecone pinecone = new Pinecone.Builder(apiKey).build();
+            // Configure OkHttpClient with longer timeouts for delete operations
+            // Delete operations can take longer, especially for large indexes
+            OkHttpClient httpClient = new OkHttpClient.Builder()
+                    .connectTimeout(30, TimeUnit.SECONDS)
+                    .readTimeout(120, TimeUnit.SECONDS)
+                    .writeTimeout(30, TimeUnit.SECONDS)
+                    .build();
+
+            Pinecone pinecone = new Pinecone.Builder(apiKey)
+                    .withOkHttpClient(httpClient)
+                    .build();
             IndexCleanupUtility utility = new IndexCleanupUtility(
                 pinecone,
                 parsedArgs.ageThresholdDays,
@@ -243,8 +255,9 @@ private boolean cleanupIndex(IndexModel index) throws Exception {
         pinecone.deleteIndex(indexName);
         logInfo("Successfully initiated deletion of index: %s", indexName);
 
-        // Add small delay to avoid rate limiting
-        Thread.sleep(1000);
+        // Add delay to avoid overwhelming the backend
+        logInfo("Waiting 30 seconds before next deletion...");
+        Thread.sleep(30000);
         return true;
     }
 
@@ -279,8 +292,9 @@ private boolean cleanupCollection(CollectionModel collection) throws Exception {
         pinecone.deleteCollection(collectionName);
         logInfo("Successfully initiated deletion of collection: %s", collectionName);
 
-        // Add small delay to avoid rate limiting
-        Thread.sleep(1000);
+        // Add delay to avoid overwhelming the backend
+        logInfo("Waiting 30 seconds before next deletion...");
+        Thread.sleep(30000);
         return true;
     }