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15 changes: 15 additions & 0 deletions README.md
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<div align="center">
<img src="./images/DeltaBreed.svg" alt="DeltaBreed Logo" width="300">
</div>

<h2 align="center">
This repo contains the docker-compose configurations used to run DeltaBreed.
</h2>

# Prereqs
Docker and Docker-compose are both required.

# Architecture
The primary components of DeltaBreed are the Web UI (Breeding-Insight/bi-web) and the API (Breeding-Insight/bi-api).
The [BrAPI Java Server](https://github.com/plantbreeding/brapi-Java-TestServer) is used for phenotypic data storage, [Gigwa](https://github.com/SouthGreenPlatform/Gigwa2) is used for genotypic data storage, and interoperability with external applications such as [Field Book](https://github.com/PhenoApps/Field-Book/) is enabled by [BrAPI](https://brapi.org/).
DeltaBreed uses [ORCID](https://orcid.org/) for authentication.

![DeltaBreed v1.0 architecture diagram.](./images/architecture.1.0.png)

# Configuration
The containers are not run by the root user but by a new user and group called
'host'. The user and group ids for host are both set to 1001 by default. If
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